<p>Graphs showing fold changes between 4-cell/2-cell stages derived from ddCt values (black bars; qPCR) and identified by RNA sequencing (green bars; RNA-seq). <a href="http://www.plosone.org/article/info:doi/10.1371/journal.pone.0061547#pone-0061547-g001" target="_blank">Figure 1A</a> shows the validation results for genes identified as enriched at 2-cell stage. Grey bars named Bc qPCR show fold changes between blastocyst/2-cell stages and demonstrate the tendency towards continuous decrease in the amount of these transcripts. <a href="http://www.plosone.org/article/info:doi/10.1371/journal.pone.0061547#pone-0061547-g001" target="_blank">Figure 1B</a> shows the validation results for genes identified as enriched at 4-cell stage.</p
<p>Black bars indicate fold change from the RNA-seq data calculated by edgeR. Fold change for qRT-PC...
<p>Gene specific primers for RT-qPCR were mentioned in <a href="http://www.plosone.org/article/info:...
<p>The same RNA used for Agilent microarrays was examined by QRTPCR. All fold changes were calculate...
<p>Gene specific primers for RT-qPCR were mentioned in <a href="http://www.plosone.org/article/info:...
<p>The differing expressions of 12 miRNAs, as determined by sequencing, were validated by qPCR assay...
<p>qPCR analysis was performed on 7 genes to confirm the transcript abundance seen with the microarr...
<p>The same RNA used for RNAseq was used for qPCR. The ΔΔCt method was used for calculation of gene ...
<p>For each gene, 3 comparisons are shown in the figure. Upper panel: fold changes between RNA-Seq R...
<p>Bar plots and inset scatter plot show a comparison of RNA-seq and RT-qPCR fold change values obta...
<p>For the evaluation, we selected the most highly expressed genes involved in both DNA damage and p...
<p>Validation of changes in mRNA expression by quantitative real-time RT-PCR (qRT-PCR) for genes rep...
<p>RT-qPCR was used to validate the RNA sequencing data using total RNA isolated from mock-infected ...
<p>A total of 30 genes, including (A) 10 downregulated, (B) 10 upregulated, and (C) 10 unigenes with...
<p>qPCR validation of 8 genes from three CLR developmental stages. (a) Comparison of expression leve...
<p>Log ratio of microarray fold change expression of the selected 20 up and down regulated genes ass...
<p>Black bars indicate fold change from the RNA-seq data calculated by edgeR. Fold change for qRT-PC...
<p>Gene specific primers for RT-qPCR were mentioned in <a href="http://www.plosone.org/article/info:...
<p>The same RNA used for Agilent microarrays was examined by QRTPCR. All fold changes were calculate...
<p>Gene specific primers for RT-qPCR were mentioned in <a href="http://www.plosone.org/article/info:...
<p>The differing expressions of 12 miRNAs, as determined by sequencing, were validated by qPCR assay...
<p>qPCR analysis was performed on 7 genes to confirm the transcript abundance seen with the microarr...
<p>The same RNA used for RNAseq was used for qPCR. The ΔΔCt method was used for calculation of gene ...
<p>For each gene, 3 comparisons are shown in the figure. Upper panel: fold changes between RNA-Seq R...
<p>Bar plots and inset scatter plot show a comparison of RNA-seq and RT-qPCR fold change values obta...
<p>For the evaluation, we selected the most highly expressed genes involved in both DNA damage and p...
<p>Validation of changes in mRNA expression by quantitative real-time RT-PCR (qRT-PCR) for genes rep...
<p>RT-qPCR was used to validate the RNA sequencing data using total RNA isolated from mock-infected ...
<p>A total of 30 genes, including (A) 10 downregulated, (B) 10 upregulated, and (C) 10 unigenes with...
<p>qPCR validation of 8 genes from three CLR developmental stages. (a) Comparison of expression leve...
<p>Log ratio of microarray fold change expression of the selected 20 up and down regulated genes ass...
<p>Black bars indicate fold change from the RNA-seq data calculated by edgeR. Fold change for qRT-PC...
<p>Gene specific primers for RT-qPCR were mentioned in <a href="http://www.plosone.org/article/info:...
<p>The same RNA used for Agilent microarrays was examined by QRTPCR. All fold changes were calculate...