snakePipes 2.3.1 Fixed aligner options for bwa in DNA-mapping. Fixed allelic mode for single end reads . Bumped hiC explorer version in HiC
snakePipes 2.4.0 Added support for multiple pairwise comparisons for DESeq2, sleuth, and rMats in t...
snakePipes 2.2.2 Fix DAG inconsistencies for ChIP-seq and ATAC-seq ran fromBAM and from -d. DESeq2 ...
snakePipes 2.4.1 Fixed sampleSheet splitting for multiple pairwise comparisons when group "All" is ...
snakePipes 2.3.1 Fixed aligner options for bwa in DNA-mapping. Fixed allelic mode for single end re...
Bug fixes: multiQC in RNAseq allelic checks for successful sample identification in workflows where...
Documentation updates A few minor bug fixes, such as a multiQC input in the HiC pipelin
snakePipes 2.2.1 Fix a bug in DAG for ChIPseq allelic with CSAW. Fixed deepTools qc DAG for ChIPseq...
Updated citation for snakePipes Fixed replicate check for samples with trailing spaces in names Fixe...
snakePipes 2.4.2 Deeptools coverage RPKM in mRNA-seq and noncoding-RNA-seq worflows now respects bl...
The initial production release, supporting RNA-seq, ChIP-seq, scRNA-seq (Cel-seq2), ATAC-seq and mor...
snakePipes 2.2.3 Genrich will now run if sampleSheet without replicates is provided. Updated zenodo...
Snakemake version is bumped to 5.13.0 Updated docs on running single snakefiles Added user-input tar...
snakemake version >= 6.2.1 python version >= 3.7 added snakeMake in readme bug fix 777, 781 multiqc ...
snakePipes 2.4.3 Fixed noncoding-RNA-seq workflow without sample sheet. Updated links to prebuilt i...
snakePipes 2.2.0 Added Alevin mode in scRNA workflow Added a new conda environment using to call Al...
snakePipes 2.4.0 Added support for multiple pairwise comparisons for DESeq2, sleuth, and rMats in t...
snakePipes 2.2.2 Fix DAG inconsistencies for ChIP-seq and ATAC-seq ran fromBAM and from -d. DESeq2 ...
snakePipes 2.4.1 Fixed sampleSheet splitting for multiple pairwise comparisons when group "All" is ...
snakePipes 2.3.1 Fixed aligner options for bwa in DNA-mapping. Fixed allelic mode for single end re...
Bug fixes: multiQC in RNAseq allelic checks for successful sample identification in workflows where...
Documentation updates A few minor bug fixes, such as a multiQC input in the HiC pipelin
snakePipes 2.2.1 Fix a bug in DAG for ChIPseq allelic with CSAW. Fixed deepTools qc DAG for ChIPseq...
Updated citation for snakePipes Fixed replicate check for samples with trailing spaces in names Fixe...
snakePipes 2.4.2 Deeptools coverage RPKM in mRNA-seq and noncoding-RNA-seq worflows now respects bl...
The initial production release, supporting RNA-seq, ChIP-seq, scRNA-seq (Cel-seq2), ATAC-seq and mor...
snakePipes 2.2.3 Genrich will now run if sampleSheet without replicates is provided. Updated zenodo...
Snakemake version is bumped to 5.13.0 Updated docs on running single snakefiles Added user-input tar...
snakemake version >= 6.2.1 python version >= 3.7 added snakeMake in readme bug fix 777, 781 multiqc ...
snakePipes 2.4.3 Fixed noncoding-RNA-seq workflow without sample sheet. Updated links to prebuilt i...
snakePipes 2.2.0 Added Alevin mode in scRNA workflow Added a new conda environment using to call Al...
snakePipes 2.4.0 Added support for multiple pairwise comparisons for DESeq2, sleuth, and rMats in t...
snakePipes 2.2.2 Fix DAG inconsistencies for ChIP-seq and ATAC-seq ran fromBAM and from -d. DESeq2 ...
snakePipes 2.4.1 Fixed sampleSheet splitting for multiple pairwise comparisons when group "All" is ...
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