The defualt value for --skip_regex was incorrectly formatted. Thanks to @ekernf01 for spotting (#231/#256
Bug Fix Convert DANDI: resource identifiers to lowercase when prepending "https://identifiers.org/"...
10x format in repLoad(): added C genes support Support for vdjtools format with "freq" header instea...
Fix for #55 - FitSpectrum file read skips first line. Thank you schooft for the repor
Mainly minor debug and improved detection of incorrect command line options. Minor updates to docume...
A long overdue release covering some minor functionality updates and bugfixes: Additional functional...
Bugfix whitelist --filtered-out with SE reads threw an unassigned error. Thanks @yech1990 for recti...
Debug for KeyError when some reads are missing a cell barode tag and stats output required from umi_...
New features Adds '--umi-separator' option to umi_tools extract to specify UMI separator. Thanks @o...
Corrects the edit distance comparison used to generate the network for the directional method. This...
The code has been tweaked to improve run-time. See #69 for a discussion about the changes implemente...
Tweaks the way group handles paired end BAMs. To simplify the process and ensure all reads are writt...
This release is intended to be a stable release with no plans for significant updates to UMI-tools f...
Improves the group command: Adds the --subset option as per the dedup command (#74) Corrects the fl...
When using the directional method with the group command, the 'top' UMI within each group was not al...
When using the directional method with the group command, the 'top' UMI within each group was not al...
Bug Fix Convert DANDI: resource identifiers to lowercase when prepending "https://identifiers.org/"...
10x format in repLoad(): added C genes support Support for vdjtools format with "freq" header instea...
Fix for #55 - FitSpectrum file read skips first line. Thank you schooft for the repor
Mainly minor debug and improved detection of incorrect command line options. Minor updates to docume...
A long overdue release covering some minor functionality updates and bugfixes: Additional functional...
Bugfix whitelist --filtered-out with SE reads threw an unassigned error. Thanks @yech1990 for recti...
Debug for KeyError when some reads are missing a cell barode tag and stats output required from umi_...
New features Adds '--umi-separator' option to umi_tools extract to specify UMI separator. Thanks @o...
Corrects the edit distance comparison used to generate the network for the directional method. This...
The code has been tweaked to improve run-time. See #69 for a discussion about the changes implemente...
Tweaks the way group handles paired end BAMs. To simplify the process and ensure all reads are writt...
This release is intended to be a stable release with no plans for significant updates to UMI-tools f...
Improves the group command: Adds the --subset option as per the dedup command (#74) Corrects the fl...
When using the directional method with the group command, the 'top' UMI within each group was not al...
When using the directional method with the group command, the 'top' UMI within each group was not al...
Bug Fix Convert DANDI: resource identifiers to lowercase when prepending "https://identifiers.org/"...
10x format in repLoad(): added C genes support Support for vdjtools format with "freq" header instea...
Fix for #55 - FitSpectrum file read skips first line. Thank you schooft for the repor
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