Bugfix whitelist --filtered-out with SE reads threw an unassigned error. Thanks @yech1990 for rectifying this (#453) Also includes a very minor update of syntax (#455
Switched to custom reader for CIF and mmCIF to more fully support their features and remove bugs
Try to fix PyPI page rendering and also fix another test warning (unclosed file)
This release is compatible with pysam-0.10.0 and it is also half way through the upgrade to Python 3...
The code has been tweaked to improve run-time. See #69 for a discussion about the changes implemente...
Debug to support python 3.11. Thank you @sjaenick for bringing this to our attention and testing (#5...
This release is intended to be a stable release with no plans for significant updates to UMI-tools f...
A long overdue release covering some minor functionality updates and bugfixes: Additional functional...
Mainly minor debug and improved detection of incorrect command line options. Minor updates to docume...
The defualt value for --skip_regex was incorrectly formatted. Thanks to @ekernf01 for spotting (#231...
New features Adds '--umi-separator' option to umi_tools extract to specify UMI separator. Thanks @o...
Debug for KeyError when some reads are missing a cell barode tag and stats output required from umi_...
When using the directional method with the group command, the 'top' UMI within each group was not al...
When using the directional method with the group command, the 'top' UMI within each group was not al...
Improves run time for large networks (see #94, #31). Thanks to @gpratt for identifying the issue and...
Bugfixes in filters AUP AuthN Fixes in frontend Added detailed statistics Localization files are b...
Switched to custom reader for CIF and mmCIF to more fully support their features and remove bugs
Try to fix PyPI page rendering and also fix another test warning (unclosed file)
This release is compatible with pysam-0.10.0 and it is also half way through the upgrade to Python 3...
The code has been tweaked to improve run-time. See #69 for a discussion about the changes implemente...
Debug to support python 3.11. Thank you @sjaenick for bringing this to our attention and testing (#5...
This release is intended to be a stable release with no plans for significant updates to UMI-tools f...
A long overdue release covering some minor functionality updates and bugfixes: Additional functional...
Mainly minor debug and improved detection of incorrect command line options. Minor updates to docume...
The defualt value for --skip_regex was incorrectly formatted. Thanks to @ekernf01 for spotting (#231...
New features Adds '--umi-separator' option to umi_tools extract to specify UMI separator. Thanks @o...
Debug for KeyError when some reads are missing a cell barode tag and stats output required from umi_...
When using the directional method with the group command, the 'top' UMI within each group was not al...
When using the directional method with the group command, the 'top' UMI within each group was not al...
Improves run time for large networks (see #94, #31). Thanks to @gpratt for identifying the issue and...
Bugfixes in filters AUP AuthN Fixes in frontend Added detailed statistics Localization files are b...
Switched to custom reader for CIF and mmCIF to more fully support their features and remove bugs
Try to fix PyPI page rendering and also fix another test warning (unclosed file)
This release is compatible with pysam-0.10.0 and it is also half way through the upgrade to Python 3...
DOI
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