<p>Two instances of a NF-Y related CCAAT motif are observed in the three different cell lines. Additionally we observe an Sp1 related motif (GGCGG). Finally, an E-box motif was found in the proximal regions for the K562 and GM12878 cell line.</p
The CCAAT box is an important promoter element regulated by NF-Y, a conserved trimer with histone-li...
ChIP-seq peaks for three TFs [34,40,33] were used to intersect MF motifs. The motif families were ra...
<p>(A) 4,428 SNPs identified by resequencing at as many sites. Y-axis indicates the number of SNPs i...
<p>In contrast to the proximal genomic intervals no enrichment of CCAAT box motifs was found in the ...
<p>Proportion of AP-1 motif occurrence in proximal and distal genomic ChIP-seq intervals bound by c-...
<div><p>ChIP-seq experiments detect the chromatin occupancy of known transcription factors in a geno...
<p>Shown are the numbers of ChIP-seq genomic intervals found in three cell lines (HeLa S3, K562, GM1...
<p>The percentage of genomic intervals that harbor an AP-1 motif was calculated and plotted against ...
<p>(<b>a</b>): Logo plot representing the AP-1 PWM from the TRANSFAC database. (<b>b</b>) Logo plot ...
<p>Genes were identified in the motif position analysis with z-score> = 3. Thirteen modules were ide...
<p>Shown are the numbers of ChIP-seq intervals found in three cell lines (HeLa S3, K562, GM12878) th...
<p>(A) Sequence motifs enriched at Sp1/Sp3 and Sp2 binding sites. Logos were obtained by running MEM...
<p>(A) In motif-targeted RGCs, the expression of ChR2-GFP was concentrated in the AISs and co-locali...
<p>Genes were identified by motif enrichment analysis with pValue for the G-box motif < = 0.001. Ele...
Within the IDR motifs of 14 amino acids or more that were from 48–88% identical in sequence are high...
The CCAAT box is an important promoter element regulated by NF-Y, a conserved trimer with histone-li...
ChIP-seq peaks for three TFs [34,40,33] were used to intersect MF motifs. The motif families were ra...
<p>(A) 4,428 SNPs identified by resequencing at as many sites. Y-axis indicates the number of SNPs i...
<p>In contrast to the proximal genomic intervals no enrichment of CCAAT box motifs was found in the ...
<p>Proportion of AP-1 motif occurrence in proximal and distal genomic ChIP-seq intervals bound by c-...
<div><p>ChIP-seq experiments detect the chromatin occupancy of known transcription factors in a geno...
<p>Shown are the numbers of ChIP-seq genomic intervals found in three cell lines (HeLa S3, K562, GM1...
<p>The percentage of genomic intervals that harbor an AP-1 motif was calculated and plotted against ...
<p>(<b>a</b>): Logo plot representing the AP-1 PWM from the TRANSFAC database. (<b>b</b>) Logo plot ...
<p>Genes were identified in the motif position analysis with z-score> = 3. Thirteen modules were ide...
<p>Shown are the numbers of ChIP-seq intervals found in three cell lines (HeLa S3, K562, GM12878) th...
<p>(A) Sequence motifs enriched at Sp1/Sp3 and Sp2 binding sites. Logos were obtained by running MEM...
<p>(A) In motif-targeted RGCs, the expression of ChR2-GFP was concentrated in the AISs and co-locali...
<p>Genes were identified by motif enrichment analysis with pValue for the G-box motif < = 0.001. Ele...
Within the IDR motifs of 14 amino acids or more that were from 48–88% identical in sequence are high...
The CCAAT box is an important promoter element regulated by NF-Y, a conserved trimer with histone-li...
ChIP-seq peaks for three TFs [34,40,33] were used to intersect MF motifs. The motif families were ra...
<p>(A) 4,428 SNPs identified by resequencing at as many sites. Y-axis indicates the number of SNPs i...
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