<p>Shown are the numbers of ChIP-seq intervals found in three cell lines (HeLa S3, K562, GM12878) that interact with c-Fos (blue) or NF-YB (yellow), or with both of them (green). Left: Venn diagram displaying the distribution of proximal intervals among the three classes. Center: Histograms showing the numbers of intervals having no CCAAT box motif (0), one CCAAT box (1), two CCAAT boxes as inverted or everted repeat (1,1), or two or more CCAAT boxes as direct repeat (> = 2). The histograms on the right show the distance distribution of the direct repeats for each class. The dashed lines highlight the distances 24bp, 31bp, 41bp, and 51 bp.</p
<p>In contrast to the proximal genomic intervals no enrichment of CCAAT box motifs was found in the ...
<p><b>A</b>: The SP cells were identified on the basis of their capacity to exclude the fluorescent ...
<p><b>(A)</b> The spectrum of base changes at ADO sites. Plotted is the mean percentage of ADO sites...
<p>Shown are the numbers of ChIP-seq genomic intervals found in three cell lines (HeLa S3, K562, GM1...
<p>The total numbers of ChIP-seq intervals that are bound either by c-Fos, NF-YB, or by both of them...
<p>Proportion of AP-1 motif occurrence in proximal and distal genomic ChIP-seq intervals bound by c-...
<p>Genomic proximal (p) and distal (d) intervals precipitated with anti-c-fos and and-NF-YB antibodi...
<p>Data from K562 cell line. Diagonal line is of y = x. Statistically significant data points (Fishe...
<p>Two instances of a NF-Y related CCAAT motif are observed in the three different cell lines. Addit...
<p>a) Typical examples of Cy3-DNA single cell fluorescence for different fragment lengths (<i>ΔpilV<...
<p>There are two sets of three columns for the model parameters (number of microtubules, mean of the...
(a) Distance distribution of DLoopCaller identified chromatin loops from Hi-C contact maps by using ...
(a) Venn diagram of CTCF ChIA-PET chromatin loops determined by DLoopCaller and Peakachu in GM12878;...
<p>Top panels: distributions of alternate nucleotide proportions for on- and off-SNP allele-dependen...
<p>A, GFP-VirB8 foci distances from 76 cells shown as two superimposed histograms of peak to peak di...
<p>In contrast to the proximal genomic intervals no enrichment of CCAAT box motifs was found in the ...
<p><b>A</b>: The SP cells were identified on the basis of their capacity to exclude the fluorescent ...
<p><b>(A)</b> The spectrum of base changes at ADO sites. Plotted is the mean percentage of ADO sites...
<p>Shown are the numbers of ChIP-seq genomic intervals found in three cell lines (HeLa S3, K562, GM1...
<p>The total numbers of ChIP-seq intervals that are bound either by c-Fos, NF-YB, or by both of them...
<p>Proportion of AP-1 motif occurrence in proximal and distal genomic ChIP-seq intervals bound by c-...
<p>Genomic proximal (p) and distal (d) intervals precipitated with anti-c-fos and and-NF-YB antibodi...
<p>Data from K562 cell line. Diagonal line is of y = x. Statistically significant data points (Fishe...
<p>Two instances of a NF-Y related CCAAT motif are observed in the three different cell lines. Addit...
<p>a) Typical examples of Cy3-DNA single cell fluorescence for different fragment lengths (<i>ΔpilV<...
<p>There are two sets of three columns for the model parameters (number of microtubules, mean of the...
(a) Distance distribution of DLoopCaller identified chromatin loops from Hi-C contact maps by using ...
(a) Venn diagram of CTCF ChIA-PET chromatin loops determined by DLoopCaller and Peakachu in GM12878;...
<p>Top panels: distributions of alternate nucleotide proportions for on- and off-SNP allele-dependen...
<p>A, GFP-VirB8 foci distances from 76 cells shown as two superimposed histograms of peak to peak di...
<p>In contrast to the proximal genomic intervals no enrichment of CCAAT box motifs was found in the ...
<p><b>A</b>: The SP cells were identified on the basis of their capacity to exclude the fluorescent ...
<p><b>(A)</b> The spectrum of base changes at ADO sites. Plotted is the mean percentage of ADO sites...