<p>Solid lines labeled ‘F’ and ‘N’ were computed from Eq. (82) of <a href="http://www.plosone.org/article/info:doi/10.1371/journal.pone.0034439#pone.0034439.s001" target="_blank">Text S1</a> and represent predicted dose responses for the ‘far’ and ‘near’ single binding site promoters, respectively, of the Joung et al. study <a href="http://www.plosone.org/article/info:doi/10.1371/journal.pone.0034439#pone.0034439-Joung1" target="_blank">[5]</a>. The dashed line indicates the sum of the activities of the single binding site promoters. The solid line labeled ‘F+N’ was computed from Eq. (25) and corresponds to the predicted dose response of the double binding site promoter. The diamond indicates the critical transcription factor dose obtained ...
Figures in the first column: schematic of the experiment 2: comparison of the expression ranges of r...
<p>Comparison between expected numbers of induced DSB and hit domains as function of the dose; the c...
<p>The values represent relative promoter activities as ratios of the luciferase activity expressed ...
<p>The solid line ‘DS’ was computed from Eq. (25) and represents the fold change of the transcriptio...
<p>For rescaled activator concentrations and corresponding to a point ‘above’ (‘below’) the hyperb...
<p>Bars labeled ‘D’ represent the magnitude of a reported greater-than-additive effect. Panels A–B, ...
<p>The predictions are derived by examining the formulas for these parameters as shown in <a href="h...
<p><b> and </b><b> domains due to three-body interactions.</b> The function was computed from Eqs. ...
<div><p>(A) Relatively small <i>r</i><sub>1</sub>, high constitutive activation, and large K<sub>d</...
<p>The larger filled black circles show the transcriptional response of CYP1A1 at 6 hours in T47-D c...
<p>A. Top: Normalized dose-response curves for synthetic <i>recA</i> promoters. Bottom: Correlation ...
<p>The thermostatistical model of transcription initiation predicts different dose response patterns...
<p>(A) Tabulated view of all matched matrix sequences for transcription factors (TF) as displayed in...
Promoters are important regulatory elements that contain the necessary sequence features for cells t...
<p>Promoter signatures for all transcription factors with more than twenty screened bound intergenic...
Figures in the first column: schematic of the experiment 2: comparison of the expression ranges of r...
<p>Comparison between expected numbers of induced DSB and hit domains as function of the dose; the c...
<p>The values represent relative promoter activities as ratios of the luciferase activity expressed ...
<p>The solid line ‘DS’ was computed from Eq. (25) and represents the fold change of the transcriptio...
<p>For rescaled activator concentrations and corresponding to a point ‘above’ (‘below’) the hyperb...
<p>Bars labeled ‘D’ represent the magnitude of a reported greater-than-additive effect. Panels A–B, ...
<p>The predictions are derived by examining the formulas for these parameters as shown in <a href="h...
<p><b> and </b><b> domains due to three-body interactions.</b> The function was computed from Eqs. ...
<div><p>(A) Relatively small <i>r</i><sub>1</sub>, high constitutive activation, and large K<sub>d</...
<p>The larger filled black circles show the transcriptional response of CYP1A1 at 6 hours in T47-D c...
<p>A. Top: Normalized dose-response curves for synthetic <i>recA</i> promoters. Bottom: Correlation ...
<p>The thermostatistical model of transcription initiation predicts different dose response patterns...
<p>(A) Tabulated view of all matched matrix sequences for transcription factors (TF) as displayed in...
Promoters are important regulatory elements that contain the necessary sequence features for cells t...
<p>Promoter signatures for all transcription factors with more than twenty screened bound intergenic...
Figures in the first column: schematic of the experiment 2: comparison of the expression ranges of r...
<p>Comparison between expected numbers of induced DSB and hit domains as function of the dose; the c...
<p>The values represent relative promoter activities as ratios of the luciferase activity expressed ...