<p>(A) Tabulated view of all matched matrix sequences for transcription factors (TF) as displayed in <a href="http://www.plosone.org/article/info:doi/10.1371/journal.pone.0026465#pone-0026465-g003" target="_blank">figure 3</a>. Hits for transcription factors which were generated according to different matrices representing the same transcription factor were summed up. (B) Schematic representation of matched binding sites for transcription factors (arrows) within proximal promoters of the eight verified hypoxia-induced genes and WDR73. Overlapping binding sites of different matrices which represent the same transcription factor (family) are indicated as single site in the figure. Binding sites of the unknown factor were omitted.</p
<p>HeLa cells were transfected with reporter plasmids containing promoter regions of mouse LDHA (<b>...
<p>The underlined sequences are putative binding sites for transcription factors in the <i>FTO</i> p...
<p>Polymorphic loci are shadowed in gray and the first polymorphic locus of each line is numbered on...
<p>The figure displays the sequences of matched position weight matrices (PWMs) together with the co...
Transcription factors, by binding to particular DNA sequences termed transcription factor-binding si...
Motivation: Modern experimental methods provide substantial in-formation on protein-DNA recognition....
Gene expression is regulated in response to metabolic necessities and environmental changes througho...
We consider a typical situation, where a researcher has determined one or more clusters of genes co-...
Transcription factors (TF) regulate expression by binding to specific DNA sequences. A binding event...
Transcription factors (TF) regulate expression by binding to specific DNA sequences. A binding event...
<p><b>A:</b> Heatmap of shared significantly overrepresented TFBS between metabolic <i>subpathways</...
Central to reconstruction of cis-regulatory networks is identification and classification of natural...
Abstract As detailed in this chapter TFBSs are among the most important elements of transcrip-tion c...
A central issue in molecular biology is understanding the regulatory mechanisms that control gene ex...
which permits unrestricted use, distribution, and reproduction in any medium, provided the original ...
<p>HeLa cells were transfected with reporter plasmids containing promoter regions of mouse LDHA (<b>...
<p>The underlined sequences are putative binding sites for transcription factors in the <i>FTO</i> p...
<p>Polymorphic loci are shadowed in gray and the first polymorphic locus of each line is numbered on...
<p>The figure displays the sequences of matched position weight matrices (PWMs) together with the co...
Transcription factors, by binding to particular DNA sequences termed transcription factor-binding si...
Motivation: Modern experimental methods provide substantial in-formation on protein-DNA recognition....
Gene expression is regulated in response to metabolic necessities and environmental changes througho...
We consider a typical situation, where a researcher has determined one or more clusters of genes co-...
Transcription factors (TF) regulate expression by binding to specific DNA sequences. A binding event...
Transcription factors (TF) regulate expression by binding to specific DNA sequences. A binding event...
<p><b>A:</b> Heatmap of shared significantly overrepresented TFBS between metabolic <i>subpathways</...
Central to reconstruction of cis-regulatory networks is identification and classification of natural...
Abstract As detailed in this chapter TFBSs are among the most important elements of transcrip-tion c...
A central issue in molecular biology is understanding the regulatory mechanisms that control gene ex...
which permits unrestricted use, distribution, and reproduction in any medium, provided the original ...
<p>HeLa cells were transfected with reporter plasmids containing promoter regions of mouse LDHA (<b>...
<p>The underlined sequences are putative binding sites for transcription factors in the <i>FTO</i> p...
<p>Polymorphic loci are shadowed in gray and the first polymorphic locus of each line is numbered on...