Table S5. Evolved expression changes in response to selection for increased learning ability. Thirty-six transcripts, expressed from 34 loci, showed evidence of evolved expression regulation that was consistent across four replicate pairs of lines, as identified by three complementary methods (see Methods and Additional file 8). Transcripts are in order of increasing Fold Change, with high Fold Change indicating elevated expression in lines selected for increased learning ability. Table includes Fold Change per line pair, test statistics for edgeR, correlations with PC 6 and Ď 2 tests within line pairs, chromosomal positions of transcripts, and additional annotations from NCBI and WaspAtlas [43]. (XLSX 53â kb
Figure S6. Relation between FST and expression divergence (absolute value of log2 Fold Change) for e...
BACKGROUND: Selection acts on the phenotype, yet only the genotype is inherited. While both the phen...
Gene expression cuffdiff output (gene_exp.diff) using Nasonia transcriptome annotation 1.2. This sup...
Table S5. Evolved expression changes in response to selection for increased learning ability. Thirty...
Figure S4. Genes with consistently evolved expression differences as identified by three separate me...
Figure S5. Evolved expression changes in response to selection for increased learning ability. (a) M...
Table S2. Allele frequencies of the 118 significantly diverged SNPs in the selection and control lin...
Figure S7. Gene expression in lines selected for increased learning ability. Heatmap shows absolute ...
Table S3. Genes underlying consistently diverged SNPs. Included are genes carrying candidate SNPs in...
Figure S3. Principal Components Analysis (PCA) of transcriptome-wide expression reveals pervasive li...
Figure S8. For two genes, alternative transcripts of the same locus have evolved opposite expression...
Figure S2. Sanger sequencing validation of five significantly diverged SNPs in coding regions (see T...
Figure S1. Manhattan plots of FST values for each of the four pairs of selected versus control lines...
Table S1. Sequencing information for each of the eight pooled genomic DNA libraries. (XLSX 9â kb
Table S4. Sequencing information for each of the eight pooled RNA libraries. (XLSX 40â kb
Figure S6. Relation between FST and expression divergence (absolute value of log2 Fold Change) for e...
BACKGROUND: Selection acts on the phenotype, yet only the genotype is inherited. While both the phen...
Gene expression cuffdiff output (gene_exp.diff) using Nasonia transcriptome annotation 1.2. This sup...
Table S5. Evolved expression changes in response to selection for increased learning ability. Thirty...
Figure S4. Genes with consistently evolved expression differences as identified by three separate me...
Figure S5. Evolved expression changes in response to selection for increased learning ability. (a) M...
Table S2. Allele frequencies of the 118 significantly diverged SNPs in the selection and control lin...
Figure S7. Gene expression in lines selected for increased learning ability. Heatmap shows absolute ...
Table S3. Genes underlying consistently diverged SNPs. Included are genes carrying candidate SNPs in...
Figure S3. Principal Components Analysis (PCA) of transcriptome-wide expression reveals pervasive li...
Figure S8. For two genes, alternative transcripts of the same locus have evolved opposite expression...
Figure S2. Sanger sequencing validation of five significantly diverged SNPs in coding regions (see T...
Figure S1. Manhattan plots of FST values for each of the four pairs of selected versus control lines...
Table S1. Sequencing information for each of the eight pooled genomic DNA libraries. (XLSX 9â kb
Table S4. Sequencing information for each of the eight pooled RNA libraries. (XLSX 40â kb
Figure S6. Relation between FST and expression divergence (absolute value of log2 Fold Change) for e...
BACKGROUND: Selection acts on the phenotype, yet only the genotype is inherited. While both the phen...
Gene expression cuffdiff output (gene_exp.diff) using Nasonia transcriptome annotation 1.2. This sup...