Publication date
May 2022
DOIAbstract
Flanking sequences for PTMs added to PTM peptide tables (7aa + PTM-aa + 7aa, for each PTM of a peptide) Better crash detection in luciphor PTM process Changes in wording, QC plots Bug fixe
Flanking sequences for PTMs added to PTM peptide tables (7aa + PTM-aa + 7aa, for each PTM of a peptide) Better crash detection in luciphor PTM process Changes in wording, QC plots Bug fixe
The rate of discovery of post-translational modification (PTM) sites is increasing rapidly and is si...
<p>(A) MS/MS fragmentation of HBZ peptide DGLLSLEEELK*, where Lys is methylated. (B) MS/MS Fragmenta...
Toxicoproteomics integrates the proteomic knowledge into toxicology by enabling protein quantificati...
PTM table can be median-centered Improved handling of bad runs (e.g. 0 target or decoy PSMs for a sa...
Mainly an ENSG FDR bugfix, and some more low-quality MS support (to not crash but show QC
reruns with new or replaced sets more quantification options more SVG replacing base64 images in QC ...
TMT18 quant TIMS isobaric quant Throw out decoys that are targets before search Small fixe
Bugfix release to revert splicing target tryptic peptides from decoy proteins, which skewed the dist...
More tolerance to set names with spaces etc Dynamic memory MSGF Error message for single-channel sam...
Luciphor algo fixed to not use CID when having "auto" as activation type Quoting file names in merge...
Output table changes (order and sorting, removing X__POOL) Bugfixes Add support for TIMSTOF data Aut...
Epigenetic changes can be studied with an untargeted characterization of histone post-translational ...
<p>a) the number of parameterized PTMs by type (outer annulus) together with the number of parameter...
Post-translational modification (PTM) of proteins plays essential regulatory roles in a variety of p...
AbstractThe establishment of extremely powerful proteomics platforms able to map thousands of modifi...
The rate of discovery of post-translational modification (PTM) sites is increasing rapidly and is si...
<p>(A) MS/MS fragmentation of HBZ peptide DGLLSLEEELK*, where Lys is methylated. (B) MS/MS Fragmenta...
Toxicoproteomics integrates the proteomic knowledge into toxicology by enabling protein quantificati...
PTM table can be median-centered Improved handling of bad runs (e.g. 0 target or decoy PSMs for a sa...
Mainly an ENSG FDR bugfix, and some more low-quality MS support (to not crash but show QC
reruns with new or replaced sets more quantification options more SVG replacing base64 images in QC ...
TMT18 quant TIMS isobaric quant Throw out decoys that are targets before search Small fixe
Bugfix release to revert splicing target tryptic peptides from decoy proteins, which skewed the dist...
More tolerance to set names with spaces etc Dynamic memory MSGF Error message for single-channel sam...
Luciphor algo fixed to not use CID when having "auto" as activation type Quoting file names in merge...
Output table changes (order and sorting, removing X__POOL) Bugfixes Add support for TIMSTOF data Aut...
Epigenetic changes can be studied with an untargeted characterization of histone post-translational ...
<p>a) the number of parameterized PTMs by type (outer annulus) together with the number of parameter...
Post-translational modification (PTM) of proteins plays essential regulatory roles in a variety of p...
AbstractThe establishment of extremely powerful proteomics platforms able to map thousands of modifi...
The rate of discovery of post-translational modification (PTM) sites is increasing rapidly and is si...
<p>(A) MS/MS fragmentation of HBZ peptide DGLLSLEEELK*, where Lys is methylated. (B) MS/MS Fragmenta...
Toxicoproteomics integrates the proteomic knowledge into toxicology by enabling protein quantificati...
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