Publication date
September 2022
DOIAbstract
More tolerance to set names with spaces etc Dynamic memory MSGF Error message for single-channel sample groups in DEqM
More tolerance to set names with spaces etc Dynamic memory MSGF Error message for single-channel sample groups in DEqM
This repository contains the scripts used to identify differentially expressed genes (DEGs) and diff...
Improved naming of molecules in QCSchema, using system.name / configuration.name Added creating conf...
This release adds new operators for more complex models, some basic sensitivity analysis, a half-cel...
Bugfix in MS1 quant where too large retention time tolerance was used MS1 quant RT/mz tolerances par...
reruns with new or replaced sets more quantification options more SVG replacing base64 images in QC ...
Mainly an ENSG FDR bugfix, and some more low-quality MS support (to not crash but show QC
TMT18 quant TIMS isobaric quant Throw out decoys that are targets before search Small fixe
Output table changes (order and sorting, removing X__POOL) Bugfixes Add support for TIMSTOF data Aut...
PTM table can be median-centered Improved handling of bad runs (e.g. 0 target or decoy PSMs for a sa...
Bugfix release to revert splicing target tryptic peptides from decoy proteins, which skewed the dist...
Luciphor algo fixed to not use CID when having "auto" as activation type Quoting file names in merge...
Additional file 9: Table S3. Lists of hypermethylated CpG probes and hypermethylated gene promoters ...
This repository contains the various scripts and files used to identify differential histone post-tr...
Diacylglycerols (DAGs) are important lipid mediators in cellular signaling transduction and metaboli...
Additional file 2: Table S1. KDMs and mutant KDMs for which assays are reported including histone ma...
This repository contains the scripts used to identify differentially expressed genes (DEGs) and diff...
Improved naming of molecules in QCSchema, using system.name / configuration.name Added creating conf...
This release adds new operators for more complex models, some basic sensitivity analysis, a half-cel...
Bugfix in MS1 quant where too large retention time tolerance was used MS1 quant RT/mz tolerances par...
reruns with new or replaced sets more quantification options more SVG replacing base64 images in QC ...
Mainly an ENSG FDR bugfix, and some more low-quality MS support (to not crash but show QC
TMT18 quant TIMS isobaric quant Throw out decoys that are targets before search Small fixe
Output table changes (order and sorting, removing X__POOL) Bugfixes Add support for TIMSTOF data Aut...
PTM table can be median-centered Improved handling of bad runs (e.g. 0 target or decoy PSMs for a sa...
Bugfix release to revert splicing target tryptic peptides from decoy proteins, which skewed the dist...
Luciphor algo fixed to not use CID when having "auto" as activation type Quoting file names in merge...
Additional file 9: Table S3. Lists of hypermethylated CpG probes and hypermethylated gene promoters ...
This repository contains the various scripts and files used to identify differential histone post-tr...
Diacylglycerols (DAGs) are important lipid mediators in cellular signaling transduction and metaboli...
Additional file 2: Table S1. KDMs and mutant KDMs for which assays are reported including histone ma...
This repository contains the scripts used to identify differentially expressed genes (DEGs) and diff...
Improved naming of molecules in QCSchema, using system.name / configuration.name Added creating conf...
This release adds new operators for more complex models, some basic sensitivity analysis, a half-cel...
Add to ORKG