Fixed a bug causing a segmentation fault when running usearch_global with an empty query sequence. Also fixed a bug causing imperfect alignments to be reported with an alignment string of "=" in uc output files. Fixed typos in man file. Fixed fasta/fastq processing code regarding presence or absence of compression library header files
Add strand info to uc file after dereplication. Add info about expected errors (ee) to FASTA files w...
Fixes a problem with searching for or clustering sequences with repeats. In this new version, vsearc...
Fixed incorrect abundance output from fastx_filter and fastq_filter when relabelling
VSEARCH 1.0.13 fixes a memory allocation problem with multiple sequence alignments with clustered se...
Should fix bug in aligned sequences produced with --fastapairs and --userout (qrow, trow) options (i...
VSEARCH 1.0.10 incorporates a number of fixes and changes: fix for bug in alignment in rare cases ...
Fixed memory leak and a bug in score computation in fastq_mergepairs, and improved speed
Parallelized and improved merging of paired-end reads and adjusted some defaults. Removed progress i...
Added the --fastq_mergepairs command and associated options. This command has not been tested well y...
Fix bug with all commands involving searches in large datasets (>4Gbp). Fix format of help text
Fix bug in SIMD aligner introduced in VSEARCH version 1.2.7 leading to reduced accurac
Fix bug in column 2 of H-lines in UC output files after clustering. Resolves issue #207
This version fixes bugs with DUST-masking and lower case database sequences. Lower case sequences we...
Added --search_exact, --fastx_mask and --fastq_convert commands. Changed most commands to read FASTQ...
VSEARCH 1.0.14: Fix for ignored strand in multiple sequence alignment after clusterin
Add strand info to uc file after dereplication. Add info about expected errors (ee) to FASTA files w...
Fixes a problem with searching for or clustering sequences with repeats. In this new version, vsearc...
Fixed incorrect abundance output from fastx_filter and fastq_filter when relabelling
VSEARCH 1.0.13 fixes a memory allocation problem with multiple sequence alignments with clustered se...
Should fix bug in aligned sequences produced with --fastapairs and --userout (qrow, trow) options (i...
VSEARCH 1.0.10 incorporates a number of fixes and changes: fix for bug in alignment in rare cases ...
Fixed memory leak and a bug in score computation in fastq_mergepairs, and improved speed
Parallelized and improved merging of paired-end reads and adjusted some defaults. Removed progress i...
Added the --fastq_mergepairs command and associated options. This command has not been tested well y...
Fix bug with all commands involving searches in large datasets (>4Gbp). Fix format of help text
Fix bug in SIMD aligner introduced in VSEARCH version 1.2.7 leading to reduced accurac
Fix bug in column 2 of H-lines in UC output files after clustering. Resolves issue #207
This version fixes bugs with DUST-masking and lower case database sequences. Lower case sequences we...
Added --search_exact, --fastx_mask and --fastq_convert commands. Changed most commands to read FASTQ...
VSEARCH 1.0.14: Fix for ignored strand in multiple sequence alignment after clusterin
Add strand info to uc file after dereplication. Add info about expected errors (ee) to FASTA files w...
Fixes a problem with searching for or clustering sequences with repeats. In this new version, vsearc...
Fixed incorrect abundance output from fastx_filter and fastq_filter when relabelling
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