vsearch: VSEARCH 1.4.6
- Torbjørn Rognes
- Frédéric Mahé
- Tomas Flouri
- Daniel McDonald
- Pat Schloss
- Ben J Woodcroft
Publication date
October 2015
DOIAbstract
Fix bug in SIMD aligner introduced in VSEARCH version 1.2.7 leading to reduced accurac
Fix bug in SIMD aligner introduced in VSEARCH version 1.2.7 leading to reduced accurac
Fix bug with all commands involving searches in large datasets (>4Gbp). Fix format of help text
Bug fix for 2.0.0, see https://montreal-forced-aligner.readthedocs.io/en/latest/changelog/changelog_...
This version fixes bugs with DUST-masking and lower case database sequences. Lower case sequences we...
Version 2.1.11 fixes two bugs (issue #96) related to the SIMD implementation of alignment that might...
Should fix bug in aligned sequences produced with --fastapairs and --userout (qrow, trow) options (i...
Fixed a bug causing a segmentation fault when running usearch_global with an empty query sequence. A...
VSEARCH 1.0.10 incorporates a number of fixes and changes: fix for bug in alignment in rare cases ...
Fixed memory leak and a bug in score computation in fastq_mergepairs, and improved speed
VSEARCH 1.0.13 fixes a memory allocation problem with multiple sequence alignments with clustered se...
VSEARCH 1.0.14: Fix for ignored strand in multiple sequence alignment after clusterin
Fixes bug causing segfault when chimera detection is performed on extremely short sequences. Issue #...
Fix bug in calculation of identity metric between sequences when using the MBL definition (--iddef 3...
fix a bug: https://github.com/Jingnan-Jia/segmentation_metrics/issues/3#issue-93150921
Bug fix in `downscaleCV' Improve the internal code of `downscaleChunk' Add qdm and dqm bias correcti...
Bug Fixes improved divindel bias estimation precision (getting rid of false negatives due to errone...
Fix bug with all commands involving searches in large datasets (>4Gbp). Fix format of help text
Bug fix for 2.0.0, see https://montreal-forced-aligner.readthedocs.io/en/latest/changelog/changelog_...
This version fixes bugs with DUST-masking and lower case database sequences. Lower case sequences we...
Version 2.1.11 fixes two bugs (issue #96) related to the SIMD implementation of alignment that might...
Should fix bug in aligned sequences produced with --fastapairs and --userout (qrow, trow) options (i...
Fixed a bug causing a segmentation fault when running usearch_global with an empty query sequence. A...
VSEARCH 1.0.10 incorporates a number of fixes and changes: fix for bug in alignment in rare cases ...
Fixed memory leak and a bug in score computation in fastq_mergepairs, and improved speed
VSEARCH 1.0.13 fixes a memory allocation problem with multiple sequence alignments with clustered se...
VSEARCH 1.0.14: Fix for ignored strand in multiple sequence alignment after clusterin
Fixes bug causing segfault when chimera detection is performed on extremely short sequences. Issue #...
Fix bug in calculation of identity metric between sequences when using the MBL definition (--iddef 3...
fix a bug: https://github.com/Jingnan-Jia/segmentation_metrics/issues/3#issue-93150921
Bug fix in `downscaleCV' Improve the internal code of `downscaleChunk' Add qdm and dqm bias correcti...
Bug Fixes improved divindel bias estimation precision (getting rid of false negatives due to errone...
Fix bug with all commands involving searches in large datasets (>4Gbp). Fix format of help text
Bug fix for 2.0.0, see https://montreal-forced-aligner.readthedocs.io/en/latest/changelog/changelog_...
This version fixes bugs with DUST-masking and lower case database sequences. Lower case sequences we...
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