fixed input handling for primer mapping include htslib/tabix for preprocessing REVEL-score
3.8.0 (2022-03-12) Features genotyping support, minor fixes, performance improvements and config sc...
Fixed sample collection in vcf-report, thereby avoiding crashes on more complex scenarios
A Snakemake workflow for calling small and structural variants under any kind of scenario (tumor/nor...
Upgrade to Varlociraptor 3.1 (@johanneskoester) Best-practice formatting (@johanneskoester) Fixed re...
3.19.3 (2023-01-15) Performance Improvements update to varlociraptor 5.6.1 (#189) (4c34c84
Update to Varlociraptor 4.6 (@johanneskoesrter) Merge closeby covered regions to improve freebayes p...
Added linkouts to VarSEAK (@FelixMoelder). Updated to newer tool versions in case of GATK base recal...
More flexible TMB configuration. Updated to Varlociraptor 4.1, which is able to detect additional ar...
3.18.6 (2022-11-15) Performance Improvements update to varlociraptor 5.3.3 (#178) (41fe68a
Update to Varlociraptor 4.7, including various model improvements that should overall lead to a much...
Auto-detect insert size when mapping primer sequences (@dlaehnemann). Improved schemas for config an...
4.1.0 (2023-08-07) Features Handle trimmed fastqs plus additional fixes (#252) (13ae724
allow commenting lines in sample and unit sheets (@tedil) improved documentation (@johanneskoester) ...
Allow handling of UMIs (@FelixMoelder) Fixed plots in vcf report (@FelixMoelder) Update to varlocira...
Updated documentation (moved config documentation into readme). This is an intermediate release that...
3.8.0 (2022-03-12) Features genotyping support, minor fixes, performance improvements and config sc...
Fixed sample collection in vcf-report, thereby avoiding crashes on more complex scenarios
A Snakemake workflow for calling small and structural variants under any kind of scenario (tumor/nor...
Upgrade to Varlociraptor 3.1 (@johanneskoester) Best-practice formatting (@johanneskoester) Fixed re...
3.19.3 (2023-01-15) Performance Improvements update to varlociraptor 5.6.1 (#189) (4c34c84
Update to Varlociraptor 4.6 (@johanneskoesrter) Merge closeby covered regions to improve freebayes p...
Added linkouts to VarSEAK (@FelixMoelder). Updated to newer tool versions in case of GATK base recal...
More flexible TMB configuration. Updated to Varlociraptor 4.1, which is able to detect additional ar...
3.18.6 (2022-11-15) Performance Improvements update to varlociraptor 5.3.3 (#178) (41fe68a
Update to Varlociraptor 4.7, including various model improvements that should overall lead to a much...
Auto-detect insert size when mapping primer sequences (@dlaehnemann). Improved schemas for config an...
4.1.0 (2023-08-07) Features Handle trimmed fastqs plus additional fixes (#252) (13ae724
allow commenting lines in sample and unit sheets (@tedil) improved documentation (@johanneskoester) ...
Allow handling of UMIs (@FelixMoelder) Fixed plots in vcf report (@FelixMoelder) Update to varlocira...
Updated documentation (moved config documentation into readme). This is an intermediate release that...
3.8.0 (2022-03-12) Features genotyping support, minor fixes, performance improvements and config sc...
Fixed sample collection in vcf-report, thereby avoiding crashes on more complex scenarios
A Snakemake workflow for calling small and structural variants under any kind of scenario (tumor/nor...
DOI
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