Add Cookiecutter Conda Recipe & Error Exit Codes Error Codes: 11: Concatenating both reference files failed 12: Building mafft alignment failed 13: Running nanosherlock for the first sample failed 14: Running nanosherlock for the second sample failed 121: Guppy basecalling failed in first sample 122: minimap2 mapping failed in first sample 123: Samtools indexing failed in first sample 124: Nanopolish indexing failed in first sample 125: Nanopolish eventalign failed in first sample 126: Could not find provided fastq files for first sample 127: Could not find provided sequencing summary file for first sample 221: Guppy basecalling failed in second sample 222: minimap2 mapping failed in second sample 223: Samtools indexing failed in secon...
FletcherPenaltySolver v0.2.1 Diff since v0.2.0 Closed issues: Add restart (#46) Use JSOSolvers solv...
Change default minimap2 string from 'splice' to 'map-ont' Add sequencing summary parameter, if seque...
on startup the latest poreCov version available on Github is shown (#89) summary report file is also...
Add Cookiecutter Conda Recipe & Error Exit Codes Error Codes: 11: Concatenating both reference file...
Fixed Bugs in Code when providing the same reference sequence errors occured in magnipore.py magnip...
Version 1.1.0 Removed removed parameters: strict r2 removed coverage plots from nanosherlock R...
Bug Fix In buildModels Fixed the following: bug when multiple reference sequences were provided in ...
Removed pod5 error, as it is installable via conda now Added Error Code 15 the number of provided...
Removed Added read5 to internaly handle the input formats: fast5, slow5, blow5 and potentially pod5...
Major Bug Fixed: fixed path in the subscript "nanosherlock" is call from magnipore Updated the ...
Changed fixed the following bug in function mapFast5Files of nanosherlock.py UnboundLocalError: loc...
Added add missing xlabel to meanDiffStdAvgDist plot Changed change xlabel from "Mean Difference" ...
Plots v1.38.0 Diff since v1.37.2 Closed issues: Plot breaks when adding incorrect input (#1908) [BU...
[1.1.0] - 2019-11-05 Added #35 - Add deepTools plotFingerprint #46 - Missing gene_bed path in igeno...
v3.0.0 Major changes Add provenance support to the Data Retriever Use utf-8 as default Move scripts ...
FletcherPenaltySolver v0.2.1 Diff since v0.2.0 Closed issues: Add restart (#46) Use JSOSolvers solv...
Change default minimap2 string from 'splice' to 'map-ont' Add sequencing summary parameter, if seque...
on startup the latest poreCov version available on Github is shown (#89) summary report file is also...
Add Cookiecutter Conda Recipe & Error Exit Codes Error Codes: 11: Concatenating both reference file...
Fixed Bugs in Code when providing the same reference sequence errors occured in magnipore.py magnip...
Version 1.1.0 Removed removed parameters: strict r2 removed coverage plots from nanosherlock R...
Bug Fix In buildModels Fixed the following: bug when multiple reference sequences were provided in ...
Removed pod5 error, as it is installable via conda now Added Error Code 15 the number of provided...
Removed Added read5 to internaly handle the input formats: fast5, slow5, blow5 and potentially pod5...
Major Bug Fixed: fixed path in the subscript "nanosherlock" is call from magnipore Updated the ...
Changed fixed the following bug in function mapFast5Files of nanosherlock.py UnboundLocalError: loc...
Added add missing xlabel to meanDiffStdAvgDist plot Changed change xlabel from "Mean Difference" ...
Plots v1.38.0 Diff since v1.37.2 Closed issues: Plot breaks when adding incorrect input (#1908) [BU...
[1.1.0] - 2019-11-05 Added #35 - Add deepTools plotFingerprint #46 - Missing gene_bed path in igeno...
v3.0.0 Major changes Add provenance support to the Data Retriever Use utf-8 as default Move scripts ...
FletcherPenaltySolver v0.2.1 Diff since v0.2.0 Closed issues: Add restart (#46) Use JSOSolvers solv...
Change default minimap2 string from 'splice' to 'map-ont' Add sequencing summary parameter, if seque...
on startup the latest poreCov version available on Github is shown (#89) summary report file is also...