Removed pod5 error, as it is installable via conda now Added Error Code 15 the number of provided reference sequences it not equal 1 or 2 1 if both samples use the same reference 2 if each sample has its own reference more than 1 reference sequence per sample is still not supported Changed READMEs does not use mafft anymore if both samples have the same reference mafft introduced gaps, if both samples have the same reference, the alignment should have 100% identit
High-accuracy alignment of sequences with disease information contributes to disease treatment and p...
Remove Filter For 0 Coverage Positions Before: positions with 0 coverage (in at least 1 of both sam...
Multiple Sequence Alignment (MSA) methods are typically benchmarked on sets of reference alignments....
Fixed Bugs in Code when providing the same reference sequence errors occured in magnipore.py magnip...
Bug Fix In buildModels Fixed the following: bug when multiple reference sequences were provided in ...
Version 1.1.0 Removed removed parameters: strict r2 removed coverage plots from nanosherlock R...
Add Cookiecutter Conda Recipe & Error Exit Codes Error Codes: 11: Concatenating both reference file...
Multiple Sequence Alignment (MSA) methods are typically benchmarked on sets of refer-ence alignments...
<p>Reference dependent alignment accuracy (%) for different methods on the test sets.</p
Merged reads that aligned to the reference sequences for sample museum-1. Use with file 'Reference s...
Merged reads that aligned to the reference sequences for sample museum-2. Use with file 'Reference s...
Reference sequences for sample museum-2. Use with file 'Alignment of merged reads for museum-2'
Remove Filter For 0 Coverage Positions Before: positions with 0 coverage (in at least 1 of both sam...
Reference sequences for sample museum-1. Use with file 'Alignment of merged reads for museum-1'
In 2002, we developed and released a rapid multiple sequence alignment program MAFFT that was design...
High-accuracy alignment of sequences with disease information contributes to disease treatment and p...
Remove Filter For 0 Coverage Positions Before: positions with 0 coverage (in at least 1 of both sam...
Multiple Sequence Alignment (MSA) methods are typically benchmarked on sets of reference alignments....
Fixed Bugs in Code when providing the same reference sequence errors occured in magnipore.py magnip...
Bug Fix In buildModels Fixed the following: bug when multiple reference sequences were provided in ...
Version 1.1.0 Removed removed parameters: strict r2 removed coverage plots from nanosherlock R...
Add Cookiecutter Conda Recipe & Error Exit Codes Error Codes: 11: Concatenating both reference file...
Multiple Sequence Alignment (MSA) methods are typically benchmarked on sets of refer-ence alignments...
<p>Reference dependent alignment accuracy (%) for different methods on the test sets.</p
Merged reads that aligned to the reference sequences for sample museum-1. Use with file 'Reference s...
Merged reads that aligned to the reference sequences for sample museum-2. Use with file 'Reference s...
Reference sequences for sample museum-2. Use with file 'Alignment of merged reads for museum-2'
Remove Filter For 0 Coverage Positions Before: positions with 0 coverage (in at least 1 of both sam...
Reference sequences for sample museum-1. Use with file 'Alignment of merged reads for museum-1'
In 2002, we developed and released a rapid multiple sequence alignment program MAFFT that was design...
High-accuracy alignment of sequences with disease information contributes to disease treatment and p...
Remove Filter For 0 Coverage Positions Before: positions with 0 coverage (in at least 1 of both sam...
Multiple Sequence Alignment (MSA) methods are typically benchmarked on sets of reference alignments....