Publication date
February 2023
DOIAbstract
Seurat object & markers for each cluster (stored in .RData), and relevant meta data( including cell barcodes, tissue sources and cell state prediction(neoplastic, intermediate or non-neoplastic.)</p
Seurat object & markers for each cluster (stored in .RData), and relevant meta data( including cell barcodes, tissue sources and cell state prediction(neoplastic, intermediate or non-neoplastic.)</p
BC.Rdata: Seurat Object ST_expr_smooth_out.RData: Pre-computed smooths spatial transcriptomics gene...
Contains MethylCIBERSORT estimates for TCGA tumours, previously published in Chakravarthy et al, Nat...
Processed single-cell and single-nucleus RNA-seq data for "Cell atlas of the regenerating human live...
Seurat object and markers for each cluster(stored in .RData) and relevant metadata(including cell ba...
Tumor scRNAseq Data for MetaTiME. A large collection of uniformly processed tumor single-cell RNA-s...
FinalOutput_Breast.RData contains the results from the subtype-specific analysis in breast cancer, i...
<p>RNA-seq based marker sets created and used in this study to estimate immune cell levels in tumors...
These are the RData objects of the processed cfMeDIP data that were used to run the machine learning...
Supplementary data for generating all the figures in the paper can be found in the .RData object
Processed single-cell RNA-seq data and R code for the analyses in Guo et al., eLife 2022;10:e70341 ...
This dataset contains the processed scRNA-seq data and code used to investigate the association betw...
SingleCellExperiment objects containing raw and normalized counts, as well as reduced dimension repr...
This dataset contains the raw files, results files and R workspace files (.RData) associated with th...
scATAC-seq data in 10X-similar format (matrix.mtx, barcodes.csv, features.csv) , along with a metada...
Data for Pan-cancer classification of single cells in the tumour microenvironment. Most files are s...
BC.Rdata: Seurat Object ST_expr_smooth_out.RData: Pre-computed smooths spatial transcriptomics gene...
Contains MethylCIBERSORT estimates for TCGA tumours, previously published in Chakravarthy et al, Nat...
Processed single-cell and single-nucleus RNA-seq data for "Cell atlas of the regenerating human live...
Seurat object and markers for each cluster(stored in .RData) and relevant metadata(including cell ba...
Tumor scRNAseq Data for MetaTiME. A large collection of uniformly processed tumor single-cell RNA-s...
FinalOutput_Breast.RData contains the results from the subtype-specific analysis in breast cancer, i...
<p>RNA-seq based marker sets created and used in this study to estimate immune cell levels in tumors...
These are the RData objects of the processed cfMeDIP data that were used to run the machine learning...
Supplementary data for generating all the figures in the paper can be found in the .RData object
Processed single-cell RNA-seq data and R code for the analyses in Guo et al., eLife 2022;10:e70341 ...
This dataset contains the processed scRNA-seq data and code used to investigate the association betw...
SingleCellExperiment objects containing raw and normalized counts, as well as reduced dimension repr...
This dataset contains the raw files, results files and R workspace files (.RData) associated with th...
scATAC-seq data in 10X-similar format (matrix.mtx, barcodes.csv, features.csv) , along with a metada...
Data for Pan-cancer classification of single cells in the tumour microenvironment. Most files are s...
BC.Rdata: Seurat Object ST_expr_smooth_out.RData: Pre-computed smooths spatial transcriptomics gene...
Contains MethylCIBERSORT estimates for TCGA tumours, previously published in Chakravarthy et al, Nat...
Processed single-cell and single-nucleus RNA-seq data for "Cell atlas of the regenerating human live...
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