Additional file 1. Appendix A: Internal validation. Appendix B: Exploration of other data analysis scenarios. Appendix C: Comparison baseline characteristics to assess selection bias. Appendix D: List of 25 mutations with an unadjusted p-value below 0.05. Appendix E: Manhattan plot. Appendix F: Principle Component Analysis (PCA). Appendix G: Apparent Area Under the ROC curve. Appendix H: Boxplots of the fitted values for the host and the combined model. Appendix I: Genomic model
Goodness-of-fit of models. Table S1. Deviance explained for models using three different proxy varia...
(A) Rarefection plot: number of sequences is plotted against Chao1 estimator. Error bars indicate SE...
Additional file 1: Supplementary Tables. Table S1. Variant grouping strategies of 48 Interleukin-1 p...
Background: The severity of an influenza infection is influenced by both host and viral characterist...
Appendix to the main text, including further explanation of the models and algorithms used, descript...
BACKGROUND: The severity of an influenza infection is influenced by both host and viral characterist...
Consensus amino acid changes in the predicted PA protein compared to Richmond/1/07; Table S1b. Conse...
Number of papers published by year on reassortment, analysing all eight influenza A gene segments. *...
Figures showing normalized levels of IFNB1 (Figure S1) and identifiability of model parameters using...
(A) rarefection plot: number of sequences is plotted against Chao1 estimator. Error bars indicate SE...
Comparison of site mutations prediction (for H3N2 in the year 2003). (PDF 224 kb
Additional file 1: Table S1. Number of mapped reads mapped using BBmap per influenza A and influenza...
This file contains the lists of significant features that were selected by MCFS for all the proteins...
Pre- and post-vaccination SHM rates in selected IGHV segments according to vaccination trial. Dots d...
Sequencing and repertoire mining metrics with ImmunediveRsity [ 30 ] by vaccination trial and by ind...
Goodness-of-fit of models. Table S1. Deviance explained for models using three different proxy varia...
(A) Rarefection plot: number of sequences is plotted against Chao1 estimator. Error bars indicate SE...
Additional file 1: Supplementary Tables. Table S1. Variant grouping strategies of 48 Interleukin-1 p...
Background: The severity of an influenza infection is influenced by both host and viral characterist...
Appendix to the main text, including further explanation of the models and algorithms used, descript...
BACKGROUND: The severity of an influenza infection is influenced by both host and viral characterist...
Consensus amino acid changes in the predicted PA protein compared to Richmond/1/07; Table S1b. Conse...
Number of papers published by year on reassortment, analysing all eight influenza A gene segments. *...
Figures showing normalized levels of IFNB1 (Figure S1) and identifiability of model parameters using...
(A) rarefection plot: number of sequences is plotted against Chao1 estimator. Error bars indicate SE...
Comparison of site mutations prediction (for H3N2 in the year 2003). (PDF 224 kb
Additional file 1: Table S1. Number of mapped reads mapped using BBmap per influenza A and influenza...
This file contains the lists of significant features that were selected by MCFS for all the proteins...
Pre- and post-vaccination SHM rates in selected IGHV segments according to vaccination trial. Dots d...
Sequencing and repertoire mining metrics with ImmunediveRsity [ 30 ] by vaccination trial and by ind...
Goodness-of-fit of models. Table S1. Deviance explained for models using three different proxy varia...
(A) Rarefection plot: number of sequences is plotted against Chao1 estimator. Error bars indicate SE...
Additional file 1: Supplementary Tables. Table S1. Variant grouping strategies of 48 Interleukin-1 p...