Publication date
May 2017
DOIAbstract
python script to identify and remove sequences for each taxon that had more than one sequence per locu
python script to identify and remove sequences for each taxon that had more than one sequence per locu
5) In order to eliminate the duplicates, I used a program called dupEliminate.pl. This program finds...
Scripts to place environmental peptide sequences, from the Tara Ocean companion site, on a reference...
Python scripts to count the number of orthologs shared by each taxa and select orhtologs shared by a...
python script to identify and remove sequences for each taxon that had more than one sequence per lo...
This scripts identifies all reads with identical sequences and only writes the first occurence of a ...
A Python script to construct FASTA files containing reconstructed genome sequences of evolved clones...
Nucleotide alignments of individual chloroplast genes. Python scripts for removal of masked sites. D...
This file contains the python scripts used in this study. These scripts can be used to analysis next...
This python script cleans up the output files that come from the version 6.0 and higher of the CLC s...
This python script detects those SNPs that aren't within the specific distance of the restriction en...
Python script to count the type of sequences and also estimate the proportion of spurious alignments...
Python script used to split the single calls file(s) into individual RAD loci. The output consists o...
Raw data and custom Python code for the manuscript 'Scalable Combinatorial Synthesis of Synthetic DN...
This folder contains a short pipeline (3 Python scripts) for partitioning loci haplotype data by the...
A key concept in comparing sequence collections is the issue of redundancy. The production of sequen...
5) In order to eliminate the duplicates, I used a program called dupEliminate.pl. This program finds...
Scripts to place environmental peptide sequences, from the Tara Ocean companion site, on a reference...
Python scripts to count the number of orthologs shared by each taxa and select orhtologs shared by a...
python script to identify and remove sequences for each taxon that had more than one sequence per lo...
This scripts identifies all reads with identical sequences and only writes the first occurence of a ...
A Python script to construct FASTA files containing reconstructed genome sequences of evolved clones...
Nucleotide alignments of individual chloroplast genes. Python scripts for removal of masked sites. D...
This file contains the python scripts used in this study. These scripts can be used to analysis next...
This python script cleans up the output files that come from the version 6.0 and higher of the CLC s...
This python script detects those SNPs that aren't within the specific distance of the restriction en...
Python script to count the type of sequences and also estimate the proportion of spurious alignments...
Python script used to split the single calls file(s) into individual RAD loci. The output consists o...
Raw data and custom Python code for the manuscript 'Scalable Combinatorial Synthesis of Synthetic DN...
This folder contains a short pipeline (3 Python scripts) for partitioning loci haplotype data by the...
A key concept in comparing sequence collections is the issue of redundancy. The production of sequen...
5) In order to eliminate the duplicates, I used a program called dupEliminate.pl. This program finds...
Scripts to place environmental peptide sequences, from the Tara Ocean companion site, on a reference...
Python scripts to count the number of orthologs shared by each taxa and select orhtologs shared by a...
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