Matrix Construction Scripts
- Lemer, Sarah
DOI Publisher
Harvard DataverseAbstract
Python scripts to count the number of orthologs shared by each taxa and select orhtologs shared by a chosen minimum number of taxa
Python scripts to count the number of orthologs shared by each taxa and select orhtologs shared by a chosen minimum number of taxa
Supermatrix of 453 orthologs and 98,370 sites. Occupancy: 87.1%. Criterion: MAtrix REduction (MARE) ...
Python script to link taxon lineage information with an eXpress gene abundance outpu
Custom Python scripts used to analyze oviposition assay data, run statistics, and make graphs.</p
Matrices of concatenated orthologs in PHYLIP format and partition files used for phylogenetic analys...
The python programm that was used for calculating the allelic richness and private allelic richness ...
Concatenated matrix for phylogenomic data. The matrix has been rearranged so that codon positions ar...
Nucleotide alignments of individual chloroplast genes. Python scripts for removal of masked sites. D...
Species by Site occurrence matrix for Snake Range. Used as input matrix for Program Pairs
Species by Trapline occurrence matrix for Snake Range. Used as input matrix for Program Pairs
Matrix of discrete morphological characters utilized in the phylogenetic analysis.</p
Raw data and custom Python code for the manuscript 'Scalable Combinatorial Synthesis of Synthetic DN...
Scripts used in analyses and plotting selected figures. See also https://github.com/marekborowiec...
Scripts to place environmental peptide sequences, from the Tara Ocean companion site, on a reference...
This upload contains the MATLAB and Python implementations of the methods developed in the paper "Th...
This piece of python code provides functionality for computing the number of complex realizations of...
Supermatrix of 453 orthologs and 98,370 sites. Occupancy: 87.1%. Criterion: MAtrix REduction (MARE) ...
Python script to link taxon lineage information with an eXpress gene abundance outpu
Custom Python scripts used to analyze oviposition assay data, run statistics, and make graphs.</p
Matrices of concatenated orthologs in PHYLIP format and partition files used for phylogenetic analys...
The python programm that was used for calculating the allelic richness and private allelic richness ...
Concatenated matrix for phylogenomic data. The matrix has been rearranged so that codon positions ar...
Nucleotide alignments of individual chloroplast genes. Python scripts for removal of masked sites. D...
Species by Site occurrence matrix for Snake Range. Used as input matrix for Program Pairs
Species by Trapline occurrence matrix for Snake Range. Used as input matrix for Program Pairs
Matrix of discrete morphological characters utilized in the phylogenetic analysis.</p
Raw data and custom Python code for the manuscript 'Scalable Combinatorial Synthesis of Synthetic DN...
Scripts used in analyses and plotting selected figures. See also https://github.com/marekborowiec...
Scripts to place environmental peptide sequences, from the Tara Ocean companion site, on a reference...
This upload contains the MATLAB and Python implementations of the methods developed in the paper "Th...
This piece of python code provides functionality for computing the number of complex realizations of...
Supermatrix of 453 orthologs and 98,370 sites. Occupancy: 87.1%. Criterion: MAtrix REduction (MARE) ...
Python script to link taxon lineage information with an eXpress gene abundance outpu
Custom Python scripts used to analyze oviposition assay data, run statistics, and make graphs.</p
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