This python script detects those SNPs that aren't within the specific distance of the restriction enzyme used for GBS DNA template preparation and puts good-hits and bad-hits into separate files
Custom bash script for SNP detection using stringent approach after PyRAD/RADami analysis
python script to establish the genomic position of candidate SNPs based on the gene predictions for ...
This python script extracts unique and repetitive rows from an input csv file and puts them into two...
This python script detects those SNPs that aren't within the specific distance of the restriction en...
Nucleotide alignments of individual chloroplast genes. Python scripts for removal of masked sites. D...
This files contains the SNPs that were used to identify redundant sequences. It is based on the file...
Extracts STACKS that contain SNPs fixed between two groups, where at least a certain number of popul...
Python scripts for extracting SNPs from 1-allele RAxML (phylip) files; and script for summarizing bo...
Python script used to pull possible hits to probe loci from transcriptomes and genomes
SNPServer is a real-time flexible tool for the discovery of SNPs (single nucleotide polymorphisms) w...
SNPServer is a real-time flexible tool for the dis-covery of SNPs (single nucleotide polymorphisms) ...
python script to identify and remove sequences for each taxon that had more than one sequence per lo...
This python script cleans up the output files that come from the version 6.0 and higher of the CLC s...
Identifies SNPs that vary linearly along a gradient or populations. Fixed is defined as the SNP chan...
This file outlines the exact steps to filter variant calls into a final SNP data set. Lines are com...
Custom bash script for SNP detection using stringent approach after PyRAD/RADami analysis
python script to establish the genomic position of candidate SNPs based on the gene predictions for ...
This python script extracts unique and repetitive rows from an input csv file and puts them into two...
This python script detects those SNPs that aren't within the specific distance of the restriction en...
Nucleotide alignments of individual chloroplast genes. Python scripts for removal of masked sites. D...
This files contains the SNPs that were used to identify redundant sequences. It is based on the file...
Extracts STACKS that contain SNPs fixed between two groups, where at least a certain number of popul...
Python scripts for extracting SNPs from 1-allele RAxML (phylip) files; and script for summarizing bo...
Python script used to pull possible hits to probe loci from transcriptomes and genomes
SNPServer is a real-time flexible tool for the discovery of SNPs (single nucleotide polymorphisms) w...
SNPServer is a real-time flexible tool for the dis-covery of SNPs (single nucleotide polymorphisms) ...
python script to identify and remove sequences for each taxon that had more than one sequence per lo...
This python script cleans up the output files that come from the version 6.0 and higher of the CLC s...
Identifies SNPs that vary linearly along a gradient or populations. Fixed is defined as the SNP chan...
This file outlines the exact steps to filter variant calls into a final SNP data set. Lines are com...
Custom bash script for SNP detection using stringent approach after PyRAD/RADami analysis
python script to establish the genomic position of candidate SNPs based on the gene predictions for ...
This python script extracts unique and repetitive rows from an input csv file and puts them into two...
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