Supplementary methods. Descriptions of analysis pipelines to process the benchmarking data, and detailed outlines of the algorithms in each metaWRAP module. (DOCX 170 kb
Figure S7. Contamination of bins recovered from water, gut, and soil metagenomes with the metaWRAP-B...
Table S7. The input functional gene APM data of Hawaii Ocean metagenomic samples. (TXT 72kb
Figure S3. Logical workflow of the Reassemble_bins module, which extracts reads belonging to bins in...
Figure S1. Detailed walkthrough of the data files, software, databases, and custom scripts that meta...
Figure S8. Clustered heatmaps showing the log of bin abundance of bins extracted with metaWRAP-Bin_r...
Taxonomic distribution of reads from water, gut, and soil metagenomes, estimated with the metaWRAP-K...
Module runtime. The total real runtime of each module of metaWRAP when analyzing three samples from ...
Figure S9. MetaWRAP-Blobology visualization of water, gut, and soil metagenomes, showing the GC and ...
Figure S2. Logical workflow of the Bin_refinement modules of metaWRAP. The module takes in three bin...
Datasets used for testing MetaCRAM. This file has detailed descriptions of the 5 datasets used for t...
Table S1. The input functional gene APM data of eight typical environmental metagenomic samples. (TX...
CAMI binning summary table. The number of bins recovered at different quality thresholds (determined...
Figure S4. Completion and contamination (determined with CheckM) of bins recovered from the CAMI’s h...
Figure S5. True recall and precision (determined with AMBER) of bins recovered from the CAMI’s high,...
Figure S6. Completion of bins recovered from water, gut, and soil metagenomes with the metaWRAP-Bin_...
Figure S7. Contamination of bins recovered from water, gut, and soil metagenomes with the metaWRAP-B...
Table S7. The input functional gene APM data of Hawaii Ocean metagenomic samples. (TXT 72kb
Figure S3. Logical workflow of the Reassemble_bins module, which extracts reads belonging to bins in...
Figure S1. Detailed walkthrough of the data files, software, databases, and custom scripts that meta...
Figure S8. Clustered heatmaps showing the log of bin abundance of bins extracted with metaWRAP-Bin_r...
Taxonomic distribution of reads from water, gut, and soil metagenomes, estimated with the metaWRAP-K...
Module runtime. The total real runtime of each module of metaWRAP when analyzing three samples from ...
Figure S9. MetaWRAP-Blobology visualization of water, gut, and soil metagenomes, showing the GC and ...
Figure S2. Logical workflow of the Bin_refinement modules of metaWRAP. The module takes in three bin...
Datasets used for testing MetaCRAM. This file has detailed descriptions of the 5 datasets used for t...
Table S1. The input functional gene APM data of eight typical environmental metagenomic samples. (TX...
CAMI binning summary table. The number of bins recovered at different quality thresholds (determined...
Figure S4. Completion and contamination (determined with CheckM) of bins recovered from the CAMI’s h...
Figure S5. True recall and precision (determined with AMBER) of bins recovered from the CAMI’s high,...
Figure S6. Completion of bins recovered from water, gut, and soil metagenomes with the metaWRAP-Bin_...
Figure S7. Contamination of bins recovered from water, gut, and soil metagenomes with the metaWRAP-B...
Table S7. The input functional gene APM data of Hawaii Ocean metagenomic samples. (TXT 72kb
Figure S3. Logical workflow of the Reassemble_bins module, which extracts reads belonging to bins in...
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