Figure S5. Changes in splicing factor expression in cancers. Fold changes in expression of individual factors (from Fig. 2a) between cancers and corresponding healthy tissues are depicted. Data and tumor/cancer classifications are from The Cancer Genome Atlas (TCGA). Organisms and dendrograms as in Fig. 1d/e, splicing factor bins (orange, white, blue or mixed color boxes next to the gene symbols) as in Fig. 2a. (PDF 25 kb
All supplementary tables merged. 1: List of all identified SiMPRes. 2: All novel genes that contain ...
Table S6. Number of tumor samples with mutations in each of the 21 chromatin regulator genes in list...
Cascade database schema. The database schema for Cascade is shown with boxes differentiating the thr...
Figure S6. RNA processing factors with consistent changes in gene expression. (A and B) As in Fig. 2...
Figure S2. Distribution of gene expression changes. (A) Absolute log2 fold changes in gene expressio...
Figure S8. Analysis of alternative splicing. (A and B) As in Fig. 1a and b, but instead of gene expr...
(A) Description of all alternative splicing events in cancer cell lines after therapy. (B) Identific...
Figure S1. PCA clustering of splicing inclusion level differences between treated and untreated PDX ...
Supplementary figures. It includes all supplementary figures except Figure S4. Figure S1. Benchmark ...
This file contains supplementary Figure S9. Numbers of genes containing SNVs leading to AASs in canc...
Table S1. RNA-sequencing results for tumor tissue (a) or non-malignant lung tissue (b). Differential...
Table S8. CDGs associated with significant genome-wide expression changes in one cancer type. Up-reg...
Supplementary tables. It includes all supplementary tables. Table S1.List of 114 cancer-related gene...
Summary: Hotspot mutations in splicing factor genes have been recently reported at high frequency in...
Top ranked alternative splicing events for human and mouse reprogramming. The file contains an XLSX ...
All supplementary tables merged. 1: List of all identified SiMPRes. 2: All novel genes that contain ...
Table S6. Number of tumor samples with mutations in each of the 21 chromatin regulator genes in list...
Cascade database schema. The database schema for Cascade is shown with boxes differentiating the thr...
Figure S6. RNA processing factors with consistent changes in gene expression. (A and B) As in Fig. 2...
Figure S2. Distribution of gene expression changes. (A) Absolute log2 fold changes in gene expressio...
Figure S8. Analysis of alternative splicing. (A and B) As in Fig. 1a and b, but instead of gene expr...
(A) Description of all alternative splicing events in cancer cell lines after therapy. (B) Identific...
Figure S1. PCA clustering of splicing inclusion level differences between treated and untreated PDX ...
Supplementary figures. It includes all supplementary figures except Figure S4. Figure S1. Benchmark ...
This file contains supplementary Figure S9. Numbers of genes containing SNVs leading to AASs in canc...
Table S1. RNA-sequencing results for tumor tissue (a) or non-malignant lung tissue (b). Differential...
Table S8. CDGs associated with significant genome-wide expression changes in one cancer type. Up-reg...
Supplementary tables. It includes all supplementary tables. Table S1.List of 114 cancer-related gene...
Summary: Hotspot mutations in splicing factor genes have been recently reported at high frequency in...
Top ranked alternative splicing events for human and mouse reprogramming. The file contains an XLSX ...
All supplementary tables merged. 1: List of all identified SiMPRes. 2: All novel genes that contain ...
Table S6. Number of tumor samples with mutations in each of the 21 chromatin regulator genes in list...
Cascade database schema. The database schema for Cascade is shown with boxes differentiating the thr...