Table S8. CDGs associated with significant genome-wide expression changes in one cancer type. Up-regulation is defined as CDGs with p i , k ′ $$ {p}_{i,k}^{\prime } $$ G i , k − $$ \left|\ {G}_{i,k}^{+}\right|>\left|\ {G}_{i,k}^{-}\right| $$ ). Down-regulation is defined as CDGs with p i , k ′ $$ {p}_{i,k}^{\prime } $$ <0.05 and the number of up-regulated genes is smaller than the numsber of down-regulated genes ( G i , k + ≤ G i , k − $$ \left|\ {G}_{i,k}^{+}\right|\le \left|\ {G}_{i,k}^{-}\right| $$ ). (XLSX 9 kb
258 genes hypermethylated in more than 90% of all CIMP-H tumours. Two-hundred fifty eight CpG island...
shRNA-dependent inhibition of RB1, but not of p107 and p130, induces up-regulation of ICCG genes in ...
BACKGROUND: Recent large-scale cancer sequencing studies have discovered many novel cancer driver ge...
Table S7. Chromatin regulators dysregulated by IDH1 and CIC in LGG. |Ti| is number of tumor types wh...
Table S4. CDGs associated with significant genome-wide methylation changes in one cancer type. Hyper...
Table S2. A. Number of CDGs mutated in at least 5 samples with methylation data in one tumor type; B...
Table S6. Number of tumor samples with mutations in each of the 21 chromatin regulator genes in list...
Figure S2. Significance of overlap between genome-wide up/down-regulation and hyper/hypo-methylation...
Table S5. Results from stratified analysis for the rest of the 15 cancer types (other than LGG) whos...
Text S1. Details with some modified steps for identifying EDGs.; Results of MDGs in LGG; Results fro...
Figure S1. Mutation patterns of the identified 32 MDGs across 20 TCGA tumor types. Each row represen...
Table S1. Differential expression genes between L and P6 cell lines. Table S2. Differential expressi...
Human Epigenetic Chromatin Modification Enzymes and Epigenetic Chromatin Remodeling Factors RT2 Prof...
Methylation within specific CpG regions of the CREB3L1 gene in different breast tumor subtypes. The ...
Table S1. 519 genes coding for proteins involved in pathways from oxidative stress to cancer. Table ...
258 genes hypermethylated in more than 90% of all CIMP-H tumours. Two-hundred fifty eight CpG island...
shRNA-dependent inhibition of RB1, but not of p107 and p130, induces up-regulation of ICCG genes in ...
BACKGROUND: Recent large-scale cancer sequencing studies have discovered many novel cancer driver ge...
Table S7. Chromatin regulators dysregulated by IDH1 and CIC in LGG. |Ti| is number of tumor types wh...
Table S4. CDGs associated with significant genome-wide methylation changes in one cancer type. Hyper...
Table S2. A. Number of CDGs mutated in at least 5 samples with methylation data in one tumor type; B...
Table S6. Number of tumor samples with mutations in each of the 21 chromatin regulator genes in list...
Figure S2. Significance of overlap between genome-wide up/down-regulation and hyper/hypo-methylation...
Table S5. Results from stratified analysis for the rest of the 15 cancer types (other than LGG) whos...
Text S1. Details with some modified steps for identifying EDGs.; Results of MDGs in LGG; Results fro...
Figure S1. Mutation patterns of the identified 32 MDGs across 20 TCGA tumor types. Each row represen...
Table S1. Differential expression genes between L and P6 cell lines. Table S2. Differential expressi...
Human Epigenetic Chromatin Modification Enzymes and Epigenetic Chromatin Remodeling Factors RT2 Prof...
Methylation within specific CpG regions of the CREB3L1 gene in different breast tumor subtypes. The ...
Table S1. 519 genes coding for proteins involved in pathways from oxidative stress to cancer. Table ...
258 genes hypermethylated in more than 90% of all CIMP-H tumours. Two-hundred fifty eight CpG island...
shRNA-dependent inhibition of RB1, but not of p107 and p130, induces up-regulation of ICCG genes in ...
BACKGROUND: Recent large-scale cancer sequencing studies have discovered many novel cancer driver ge...