Additional file 1. Instruction to compile a Graphtyper version modified for the cattle chromosome complement
Additional file 2: Figure S2. QâQ plot for SCS using the variants from the Bovine 50k (A), BovineH...
Additional file 4: Table S1. Standardised cumulative proportion of times that haplotypes of the top ...
Additional file 1: Table S1. Symbols and names for all annotated candidate genes
Additional file 7. Accuracy and sensitivity of sequence variant genotyping on bovine chromosome 25 f...
Additional file 2. Properties of the different metrics used for the evaluation of sequence variant g...
Additional file 3. Concordance of heterozygous and alternate homozygous genotypes in 49 Original B...
Additional file 5. Twelve 1-Mb regions for which Graphtyper initially failed to genotype sequence va...
Additional file 6. Comparison of variant filtration using either GATK hard filtering or GATK VQSR
Additional file 4. Sequence variant genotyping quality for 18 and 31 animals that were sequenced at ...
International audienceAbstractBackgroundGenotyping of sequence variants typically involves, as a fir...
Additional file 1: Figure S1. Principal component analysis in 1577 sequenced animals. aâc Plot of ...
Additional file 6: Figure S5. Detailed view of a milk fat percentage QTL on bovine chromosome 16. Di...
Additional file 7: Table S6. Variants identified by the array-based CGH approach. This table provide...
Background The current bovine genomic reference sequence was assembled from a Hereford cow. The res...
Additional file 1. Inner candidate haplotypes detected by manual analysis of the extended confidence...
Additional file 2: Figure S2. QâQ plot for SCS using the variants from the Bovine 50k (A), BovineH...
Additional file 4: Table S1. Standardised cumulative proportion of times that haplotypes of the top ...
Additional file 1: Table S1. Symbols and names for all annotated candidate genes
Additional file 7. Accuracy and sensitivity of sequence variant genotyping on bovine chromosome 25 f...
Additional file 2. Properties of the different metrics used for the evaluation of sequence variant g...
Additional file 3. Concordance of heterozygous and alternate homozygous genotypes in 49 Original B...
Additional file 5. Twelve 1-Mb regions for which Graphtyper initially failed to genotype sequence va...
Additional file 6. Comparison of variant filtration using either GATK hard filtering or GATK VQSR
Additional file 4. Sequence variant genotyping quality for 18 and 31 animals that were sequenced at ...
International audienceAbstractBackgroundGenotyping of sequence variants typically involves, as a fir...
Additional file 1: Figure S1. Principal component analysis in 1577 sequenced animals. aâc Plot of ...
Additional file 6: Figure S5. Detailed view of a milk fat percentage QTL on bovine chromosome 16. Di...
Additional file 7: Table S6. Variants identified by the array-based CGH approach. This table provide...
Background The current bovine genomic reference sequence was assembled from a Hereford cow. The res...
Additional file 1. Inner candidate haplotypes detected by manual analysis of the extended confidence...
Additional file 2: Figure S2. QâQ plot for SCS using the variants from the Bovine 50k (A), BovineH...
Additional file 4: Table S1. Standardised cumulative proportion of times that haplotypes of the top ...
Additional file 1: Table S1. Symbols and names for all annotated candidate genes
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