Additional file 6. Comparison of variant filtration using either GATK hard filtering or GATK VQSR
Additional file 6: Table S6. The additive genetic variances explained in the models for one replicat...
Additional file 6. Frequency of the alternative allele of SNPs in our validation panel. (Sheet 1) Fr...
Additional file 1: Table S1. Symbols and names for all annotated candidate genes
Additional file 2. Properties of the different metrics used for the evaluation of sequence variant g...
Additional file 7. Accuracy and sensitivity of sequence variant genotyping on bovine chromosome 25 f...
Additional file 1. Instruction to compile a Graphtyper version modified for the cattle chromosome c...
Additional file 3. Concordance of heterozygous and alternate homozygous genotypes in 49 Original B...
Additional file 5. Twelve 1-Mb regions for which Graphtyper initially failed to genotype sequence va...
Additional file 4. Sequence variant genotyping quality for 18 and 31 animals that were sequenced at ...
International audienceAbstractBackgroundGenotyping of sequence variants typically involves, as a fir...
Additional file 6: Figure S5. Detailed view of a milk fat percentage QTL on bovine chromosome 16. Di...
Additional file 1: Figure S1. Principal component analysis in 1577 sequenced animals. aâc Plot of ...
Additional file 6: Figure S6. Comparison of the variances explained by SNPs between EMMAX_AMAT, EMMA...
Additional file 5: Table S1. Posterior standard deviations of genomic correlations between breeds. A...
Additional file 7: Table S6. Variants identified by the array-based CGH approach. This table provide...
Additional file 6: Table S6. The additive genetic variances explained in the models for one replicat...
Additional file 6. Frequency of the alternative allele of SNPs in our validation panel. (Sheet 1) Fr...
Additional file 1: Table S1. Symbols and names for all annotated candidate genes
Additional file 2. Properties of the different metrics used for the evaluation of sequence variant g...
Additional file 7. Accuracy and sensitivity of sequence variant genotyping on bovine chromosome 25 f...
Additional file 1. Instruction to compile a Graphtyper version modified for the cattle chromosome c...
Additional file 3. Concordance of heterozygous and alternate homozygous genotypes in 49 Original B...
Additional file 5. Twelve 1-Mb regions for which Graphtyper initially failed to genotype sequence va...
Additional file 4. Sequence variant genotyping quality for 18 and 31 animals that were sequenced at ...
International audienceAbstractBackgroundGenotyping of sequence variants typically involves, as a fir...
Additional file 6: Figure S5. Detailed view of a milk fat percentage QTL on bovine chromosome 16. Di...
Additional file 1: Figure S1. Principal component analysis in 1577 sequenced animals. aâc Plot of ...
Additional file 6: Figure S6. Comparison of the variances explained by SNPs between EMMAX_AMAT, EMMA...
Additional file 5: Table S1. Posterior standard deviations of genomic correlations between breeds. A...
Additional file 7: Table S6. Variants identified by the array-based CGH approach. This table provide...
Additional file 6: Table S6. The additive genetic variances explained in the models for one replicat...
Additional file 6. Frequency of the alternative allele of SNPs in our validation panel. (Sheet 1) Fr...
Additional file 1: Table S1. Symbols and names for all annotated candidate genes
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