Additional file 7. Accuracy and sensitivity of sequence variant genotyping on bovine chromosome 25 from a variation-aware genome graph that incorporated 2,143,417 dbSNP variants as prior known variants
Additional file 5: Table S7. RefSeq genes that overlap with SV. This file contains the RefSeq genes ...
International audienceAbstractBackgroundThe availability of dense genotypes and whole-genome sequenc...
AbstractRecently, for copy number variation (CNV) analysis, bovine researchers have focused mainly o...
Additional file 2. Properties of the different metrics used for the evaluation of sequence variant g...
Additional file 1. Instruction to compile a Graphtyper version modified for the cattle chromosome c...
Additional file 3. Concordance of heterozygous and alternate homozygous genotypes in 49 Original B...
Additional file 5. Twelve 1-Mb regions for which Graphtyper initially failed to genotype sequence va...
Additional file 6. Comparison of variant filtration using either GATK hard filtering or GATK VQSR
Additional file 4. Sequence variant genotyping quality for 18 and 31 animals that were sequenced at ...
International audienceAbstractBackgroundGenotyping of sequence variants typically involves, as a fir...
Additional file 1: Figure S1. Principal component analysis in 1577 sequenced animals. aâc Plot of ...
Background The current bovine genomic reference sequence was assembled from a Hereford cow. The res...
Additional file 7: Table S6. Variants identified by the array-based CGH approach. This table provide...
Additional file 6: Figure S5. Detailed view of a milk fat percentage QTL on bovine chromosome 16. Di...
Additional file 6. Frequency of the alternative allele of SNPs in our validation panel. (Sheet 1) Fr...
Additional file 5: Table S7. RefSeq genes that overlap with SV. This file contains the RefSeq genes ...
International audienceAbstractBackgroundThe availability of dense genotypes and whole-genome sequenc...
AbstractRecently, for copy number variation (CNV) analysis, bovine researchers have focused mainly o...
Additional file 2. Properties of the different metrics used for the evaluation of sequence variant g...
Additional file 1. Instruction to compile a Graphtyper version modified for the cattle chromosome c...
Additional file 3. Concordance of heterozygous and alternate homozygous genotypes in 49 Original B...
Additional file 5. Twelve 1-Mb regions for which Graphtyper initially failed to genotype sequence va...
Additional file 6. Comparison of variant filtration using either GATK hard filtering or GATK VQSR
Additional file 4. Sequence variant genotyping quality for 18 and 31 animals that were sequenced at ...
International audienceAbstractBackgroundGenotyping of sequence variants typically involves, as a fir...
Additional file 1: Figure S1. Principal component analysis in 1577 sequenced animals. aâc Plot of ...
Background The current bovine genomic reference sequence was assembled from a Hereford cow. The res...
Additional file 7: Table S6. Variants identified by the array-based CGH approach. This table provide...
Additional file 6: Figure S5. Detailed view of a milk fat percentage QTL on bovine chromosome 16. Di...
Additional file 6. Frequency of the alternative allele of SNPs in our validation panel. (Sheet 1) Fr...
Additional file 5: Table S7. RefSeq genes that overlap with SV. This file contains the RefSeq genes ...
International audienceAbstractBackgroundThe availability of dense genotypes and whole-genome sequenc...
AbstractRecently, for copy number variation (CNV) analysis, bovine researchers have focused mainly o...
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