<p>Hydrogen bond occupancy plots for each peptidomimetic are shown. In each sub-plot, the x-axis represents the serial numbers of the residues of the SH2 domain of STAT3 and the y-axis represents the hydrogen bond occupancy value for a given residue. Hydrogen bond occupancy is computed as the fraction of conformations out of 1000 conformations of a peptidomimetic in which the given residue participates in a hydrogen bond. The 1000 conformations of each peptidomimetic were derived from the corresponding 10 ns molecular dynamics trajectory. Note that a hydrogen bond is ignored if it is present in less than 500 conformations.</p
<p>The plot showing the number of hydrogen bonds between PKR and the interacting proteins in a time ...
<p>(a) Hydrogen bonds for HDAC2-C8 complex (yellow). (b) Hydrogen bonds for HDAC8-C8 complex (green)...
<p><sup><i>a</i></sup>Occupancy of hydrogen bonds (The occupancy >70% were listed).</p><p><sup><i>b<...
<p>The residues (labeled) of the SH2 domain that form hydrogen bonds with at least one of the 12 pep...
<p>For each peptidomimetic, 5 conformations in complex with the SH2 domain (in gray) of STAT3 are sh...
<p>Histograms are normalized (to an area of 1) to fit identical axes. Vertical lines indicate averag...
<p>Columns report the percentage of frames showing a particular hydrogen bond for tripeptides Xxx-Gl...
<p>The normalized frequency of occurring H-bonds over simulation time is shown. The frequency is zer...
<p>(A–B) The column represents the percent of hydrogen bonds occupancy when the residues are as hydr...
a<p> Peptide-PKA heavy atoms that form a HB (Notations of atoms refer to the name of atoms from the ...
<p>The hydrogen bonding occupancy for the residue pairs between RNA and polymerase, which were calcu...
a<p> Peptide-PKA heavy atoms that form a HB (Notations of atoms refer to the name of atoms from the ...
Hydrogen bonds between compound 18 and compound 21 with NS2B/NS3pro that found with at least 0.1% oc...
<p>[a] Occupancy of hydrogen bonds (The occupancy >70% were listed).</p><p>[b] Hydrogen bond distanc...
<p>The number of hydrogen bonds formed between ligands and active site residues of 09N1. ETT in thre...
<p>The plot showing the number of hydrogen bonds between PKR and the interacting proteins in a time ...
<p>(a) Hydrogen bonds for HDAC2-C8 complex (yellow). (b) Hydrogen bonds for HDAC8-C8 complex (green)...
<p><sup><i>a</i></sup>Occupancy of hydrogen bonds (The occupancy >70% were listed).</p><p><sup><i>b<...
<p>The residues (labeled) of the SH2 domain that form hydrogen bonds with at least one of the 12 pep...
<p>For each peptidomimetic, 5 conformations in complex with the SH2 domain (in gray) of STAT3 are sh...
<p>Histograms are normalized (to an area of 1) to fit identical axes. Vertical lines indicate averag...
<p>Columns report the percentage of frames showing a particular hydrogen bond for tripeptides Xxx-Gl...
<p>The normalized frequency of occurring H-bonds over simulation time is shown. The frequency is zer...
<p>(A–B) The column represents the percent of hydrogen bonds occupancy when the residues are as hydr...
a<p> Peptide-PKA heavy atoms that form a HB (Notations of atoms refer to the name of atoms from the ...
<p>The hydrogen bonding occupancy for the residue pairs between RNA and polymerase, which were calcu...
a<p> Peptide-PKA heavy atoms that form a HB (Notations of atoms refer to the name of atoms from the ...
Hydrogen bonds between compound 18 and compound 21 with NS2B/NS3pro that found with at least 0.1% oc...
<p>[a] Occupancy of hydrogen bonds (The occupancy >70% were listed).</p><p>[b] Hydrogen bond distanc...
<p>The number of hydrogen bonds formed between ligands and active site residues of 09N1. ETT in thre...
<p>The plot showing the number of hydrogen bonds between PKR and the interacting proteins in a time ...
<p>(a) Hydrogen bonds for HDAC2-C8 complex (yellow). (b) Hydrogen bonds for HDAC8-C8 complex (green)...
<p><sup><i>a</i></sup>Occupancy of hydrogen bonds (The occupancy >70% were listed).</p><p><sup><i>b<...