<p>Histograms are normalized (to an area of 1) to fit identical axes. Vertical lines indicate average values obtained from experimental X-ray structures (PDB-codes are noted in the figure legends). The blue histogram represents the simulation with only the molecular mechanics energy from the OPLS-AA/L force field with the GB/SA solvent model (but no chemical shift energy term). Green and yellow histograms indicate the use of OPLS force field plus an additional chemical shift energy term from ProCS or CamShift, respectively. *1OGW contains fluoro leucine at residues 50 and 67. **1IGD is a closely related homologue (see text).</p
a<p> Peptide-PKA heavy atoms that form a HB (Notations of atoms refer to the name of atoms from the ...
a) and b) Atom-positional RMSD (Å) from the starting structures as observed during the two represent...
<p>The MD simulations system used in calculations are; <b>a</b>) water box without the protein, <b>b...
<p><sup>a</sup> The ensembles are obtained from MCMC simulations using either OPLS-AA/L with the GB/...
<p>The normalized frequency of occurring H-bonds over simulation time is shown. The frequency is zer...
(A) The number of contacts between the hydrogen bond donors in the QGR motif and hydrogen bond accep...
<p>Squares denote the average coupling constant observed for that hydrogen bond in the ensemble and ...
<p>Hydrogen bond occupancy plots for each peptidomimetic are shown. In each sub-plot, the x-axis rep...
<p>Data is calculated over all amide-amide bonding pairs for which experimental spin-spin coupling ...
<div><p>(A) During the 10-ns control simulation.</p><p>(B) During the 4-ns TMD simulation.</p><p>Det...
<p>a) Root-mean-square-deviation of hβ2-AR’s backbone atoms in the MM/CG simulation of hβ2-AR.S-Car ...
<p>A), B), C) represent apo simulation D), E), F) represent holo simulation. Black: WT, red: R110P, ...
<p>Columns report the percentage of frames showing a particular hydrogen bond for tripeptides Xxx-Gl...
a<p> Peptide-PKA heavy atoms that form a HB (Notations of atoms refer to the name of atoms from the ...
<p>(A) Overall representative structure of the XfOhr-SH (cyan), E51A-XfOhr (orange) and R19A-XfOhr (...
a<p> Peptide-PKA heavy atoms that form a HB (Notations of atoms refer to the name of atoms from the ...
a) and b) Atom-positional RMSD (Å) from the starting structures as observed during the two represent...
<p>The MD simulations system used in calculations are; <b>a</b>) water box without the protein, <b>b...
<p><sup>a</sup> The ensembles are obtained from MCMC simulations using either OPLS-AA/L with the GB/...
<p>The normalized frequency of occurring H-bonds over simulation time is shown. The frequency is zer...
(A) The number of contacts between the hydrogen bond donors in the QGR motif and hydrogen bond accep...
<p>Squares denote the average coupling constant observed for that hydrogen bond in the ensemble and ...
<p>Hydrogen bond occupancy plots for each peptidomimetic are shown. In each sub-plot, the x-axis rep...
<p>Data is calculated over all amide-amide bonding pairs for which experimental spin-spin coupling ...
<div><p>(A) During the 10-ns control simulation.</p><p>(B) During the 4-ns TMD simulation.</p><p>Det...
<p>a) Root-mean-square-deviation of hβ2-AR’s backbone atoms in the MM/CG simulation of hβ2-AR.S-Car ...
<p>A), B), C) represent apo simulation D), E), F) represent holo simulation. Black: WT, red: R110P, ...
<p>Columns report the percentage of frames showing a particular hydrogen bond for tripeptides Xxx-Gl...
a<p> Peptide-PKA heavy atoms that form a HB (Notations of atoms refer to the name of atoms from the ...
<p>(A) Overall representative structure of the XfOhr-SH (cyan), E51A-XfOhr (orange) and R19A-XfOhr (...
a<p> Peptide-PKA heavy atoms that form a HB (Notations of atoms refer to the name of atoms from the ...
a) and b) Atom-positional RMSD (Å) from the starting structures as observed during the two represent...
<p>The MD simulations system used in calculations are; <b>a</b>) water box without the protein, <b>b...