Publication date
December 2016
DOIAbstract
a Perl script for counting the number loci at different tolerance levels (output a txt file
a Perl script for counting the number loci at different tolerance levels (output a txt file
This perl code calculates the stats of the data produced by Yoshizawa_etal_simuPOP_code.py. Further ...
DESeq2 script to analyze gene expression from count data. This script will call for the counts file
Perl script to compare AftrRAD loci to Stacks loci. Requires a series of output files that are list...
a Perl script for counting the number loci at different tolerance levels (output a txt file
a perl script for summarizing the number of individuals for each locus (output in a txt file
Script to count unique sequences from fast input file, reverse complementing if necessary so forward...
Perl script to calculate the rDNA unit coverage from a sequence read dataset and to estimate the num...
a Perl script for generating phylip formatted sequence files with two tolerance levels (as the numbe...
perl script to determine if a call in the 12, 48 or 96 file is present in the 0 file and if it is it...
perl script to determine how many genotype calls within the same individual are the same as the 0 ho...
This perl script computes the GenomeComposition.txt file that reports the number of synonymous, nons...
This Perl program takes a tab separated file holding G4 starting and ending locations as input and c...
<p>Perl script for calculating alien index for a set of query sequences. See README.</p
This perl script computes the spectrum of mutations found in each clone as well as the matrix used f...
Zipped set of scripts, sample input and sample output files of programs used to design SNPs to disti...
This perl code calculates the stats of the data produced by Yoshizawa_etal_simuPOP_code.py. Further ...
DESeq2 script to analyze gene expression from count data. This script will call for the counts file
Perl script to compare AftrRAD loci to Stacks loci. Requires a series of output files that are list...
a Perl script for counting the number loci at different tolerance levels (output a txt file
a perl script for summarizing the number of individuals for each locus (output in a txt file
Script to count unique sequences from fast input file, reverse complementing if necessary so forward...
Perl script to calculate the rDNA unit coverage from a sequence read dataset and to estimate the num...
a Perl script for generating phylip formatted sequence files with two tolerance levels (as the numbe...
perl script to determine if a call in the 12, 48 or 96 file is present in the 0 file and if it is it...
perl script to determine how many genotype calls within the same individual are the same as the 0 ho...
This perl script computes the GenomeComposition.txt file that reports the number of synonymous, nons...
This Perl program takes a tab separated file holding G4 starting and ending locations as input and c...
<p>Perl script for calculating alien index for a set of query sequences. See README.</p
This perl script computes the spectrum of mutations found in each clone as well as the matrix used f...
Zipped set of scripts, sample input and sample output files of programs used to design SNPs to disti...
This perl code calculates the stats of the data produced by Yoshizawa_etal_simuPOP_code.py. Further ...
DESeq2 script to analyze gene expression from count data. This script will call for the counts file
Perl script to compare AftrRAD loci to Stacks loci. Requires a series of output files that are list...
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