Zipped set of scripts, sample input and sample output files of programs used to design SNPs to distinguish 2 lines of D. persimilis, and further to extract GC content, diversity, divergence, and motif abundance of a published genomic sequence for correlation to recombination rate variation
This compressed directory contains the perl scripts used to summarize (1) the posterior distribution...
In an attempt to make the processing of RAD-seq data easier and allow rapid and automated exploratio...
Over the course of my PhD project, Genomic Analysis of Human Population Structure, I wrote over sixt...
These perl scripts were used for bi-direction structure variation identification
This perl script computes the GenomeComposition.txt file that reports the number of synonymous, nons...
Abstract Background There is a need for software scripts and modules for format parsing, data manipu...
We developed an efficient pipeline to analyze genome-wide association study single nucleotide polymo...
Perl script for converting HapMap genotype data. This Perl script requires the sample list of Additi...
a Perl script for generating phylip formatted sequence files with two tolerance levels (as the numbe...
This perl script computes the spectrum of mutations found in each clone as well as the matrix used f...
<p>We used existing sequence analysis software and customized perl scripts for this study.</p
Contains Perl & C algorithms used in the analysis as well as R scripts for producing figures. Does n...
These perl scripts were designed by Tao Cheng in 2014 for designing and evaluating ITS primers of pl...
This file contains the perl script for generating orthologous gene profiles from usearch outputs aga...
The "IdentifyLoci.pl" PERL script (original script described by Hecht et al. 2013) was modified such...
This compressed directory contains the perl scripts used to summarize (1) the posterior distribution...
In an attempt to make the processing of RAD-seq data easier and allow rapid and automated exploratio...
Over the course of my PhD project, Genomic Analysis of Human Population Structure, I wrote over sixt...
These perl scripts were used for bi-direction structure variation identification
This perl script computes the GenomeComposition.txt file that reports the number of synonymous, nons...
Abstract Background There is a need for software scripts and modules for format parsing, data manipu...
We developed an efficient pipeline to analyze genome-wide association study single nucleotide polymo...
Perl script for converting HapMap genotype data. This Perl script requires the sample list of Additi...
a Perl script for generating phylip formatted sequence files with two tolerance levels (as the numbe...
This perl script computes the spectrum of mutations found in each clone as well as the matrix used f...
<p>We used existing sequence analysis software and customized perl scripts for this study.</p
Contains Perl & C algorithms used in the analysis as well as R scripts for producing figures. Does n...
These perl scripts were designed by Tao Cheng in 2014 for designing and evaluating ITS primers of pl...
This file contains the perl script for generating orthologous gene profiles from usearch outputs aga...
The "IdentifyLoci.pl" PERL script (original script described by Hecht et al. 2013) was modified such...
This compressed directory contains the perl scripts used to summarize (1) the posterior distribution...
In an attempt to make the processing of RAD-seq data easier and allow rapid and automated exploratio...
Over the course of my PhD project, Genomic Analysis of Human Population Structure, I wrote over sixt...
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