<p>Pie graphs for total reads (A) and unique reads (B) are showing the relative abundance of sRNAs located in tRNAs, rRNAs, intergenic, exonic and intronic regions in ∆<i>ku70</i>FRT2. Alignments of sRNA-producing loci of ∆<i>ku70</i>FRT2 (C) and ∆<i>dcl2</i>∆<i>dcl1</i> (D) show that the number of sRNAs that map to both DNA strands of one feature have strongly increased and that the fraction of sRNA loci that align to exonic regions in sense orientation has decreased substantially in ∆<i>dcl2</i>∆<i>dcl1</i> compared to ∆<i>ku70</i>FRT2.</p
Surprisingly little is known about the organization and distribution of tRNAs and tRNA-related sequ...
<p>The schematic alignment shows the paralogous ribosomal gene clusters <i>rrnB</i> and <i>rrnE</i> ...
<p>Reads from the small mitochondrial RNA libraries were mapped against minicircle sequences using B...
<p>(A) Frequency of the nucleotides at the 5′ end of the sequenced small RNAs. (B) Genomic distribut...
<div><p>(A) Scrolling-window analysis (50,000-nt window and 10,000-nt scroll) of small RNA loci. Tot...
<p>A, Average percentage (Y-axis) of redundant sequences of 14–30 nt length (X-axis) in CK and TR li...
<p>(A) Normalized read count (TPTM: transcripts per ten million) of ∆<i>ku70</i>FRT2 (grey graph) an...
<p>All sRNAs are annotated to a specific category, including miRNA, siRNA, exon_sense, intron_sense,...
<p>Blue lines show the number of 5′ RACE reads mapped to respective genome, while red lines show the...
<p>(A) Fractions of sRNAs that were annotated as known ncRNA in a sodium periodate treated and untre...
<p>Length distribution of mapping sRNA reads for the datasets of total (A) and unique (B) reads obta...
<p>This figure shows the count distribution of all aligned reads on the reference rDNA sequence (Gen...
<p>(A) Diagrams show the distribution of Pol IV-dependent 24-nt siRNAs across all five <i>Arabidopsi...
<p>A. Size distribution of sequencing reads mapping to L1_Tf elements in <i>Dcr</i><sup>−/−</sup> co...
<p>Direction of transcription is from left to right. rRNA transcripts per rDNA gene were quantified ...
Surprisingly little is known about the organization and distribution of tRNAs and tRNA-related sequ...
<p>The schematic alignment shows the paralogous ribosomal gene clusters <i>rrnB</i> and <i>rrnE</i> ...
<p>Reads from the small mitochondrial RNA libraries were mapped against minicircle sequences using B...
<p>(A) Frequency of the nucleotides at the 5′ end of the sequenced small RNAs. (B) Genomic distribut...
<div><p>(A) Scrolling-window analysis (50,000-nt window and 10,000-nt scroll) of small RNA loci. Tot...
<p>A, Average percentage (Y-axis) of redundant sequences of 14–30 nt length (X-axis) in CK and TR li...
<p>(A) Normalized read count (TPTM: transcripts per ten million) of ∆<i>ku70</i>FRT2 (grey graph) an...
<p>All sRNAs are annotated to a specific category, including miRNA, siRNA, exon_sense, intron_sense,...
<p>Blue lines show the number of 5′ RACE reads mapped to respective genome, while red lines show the...
<p>(A) Fractions of sRNAs that were annotated as known ncRNA in a sodium periodate treated and untre...
<p>Length distribution of mapping sRNA reads for the datasets of total (A) and unique (B) reads obta...
<p>This figure shows the count distribution of all aligned reads on the reference rDNA sequence (Gen...
<p>(A) Diagrams show the distribution of Pol IV-dependent 24-nt siRNAs across all five <i>Arabidopsi...
<p>A. Size distribution of sequencing reads mapping to L1_Tf elements in <i>Dcr</i><sup>−/−</sup> co...
<p>Direction of transcription is from left to right. rRNA transcripts per rDNA gene were quantified ...
Surprisingly little is known about the organization and distribution of tRNAs and tRNA-related sequ...
<p>The schematic alignment shows the paralogous ribosomal gene clusters <i>rrnB</i> and <i>rrnE</i> ...
<p>Reads from the small mitochondrial RNA libraries were mapped against minicircle sequences using B...