<p>(A) Normalized read count (TPTM: transcripts per ten million) of ∆<i>ku70</i>FRT2 (grey graph) and ∆<i>dcl2</i>∆<i>dcl1</i> (black graph) of two representative Dicer-dependent coding regions, the Copia13-like transposable element Pc17g00440 and the putative DNA-binding protein Pc12g14660. (B) Dicer-independent sRNA accumulation for the coding region of the putative cell-wall protein Pc20g06530 and for a histidine tRNA-gene cluster. To ensure a faultless representation of Dicer-independent reads the graphs for ∆<i>dcl2</i>∆<i>dcl1</i> were slightly moved to the right.</p
<p>Groups of genes were identified, each with a significantly high use of one of 61 codons. Within e...
<p>(A) Genome browser view depicting the concordant and discordant coverage of the control (blue) an...
<p>(A) ECDF plots (B) Graphic display. Arrows mark Ty1 insertion sites at nucleosome-occupied positi...
<p>(A) Genome browser shot of an <i>rdrp</i>-dependent <i>dicer</i>-independent sRNA-producing locus...
<p>Pie graphs for total reads (A) and unique reads (B) are showing the relative abundance of sRNAs l...
<p>A. Size distribution of sequencing reads mapping to L1_Tf elements in <i>Dcr</i><sup>−/−</sup> co...
<p>(A) Schematic representation of the position in which sRNAs mapped to the selected genes. Each ba...
<p><sup>a</sup>Total number of loci (with normalized abundance of more than 50 reads per million) sh...
<p>The transcriptional start and stop sites of candidate sRNAs were determined by circular RACE. The...
<p>The sRNA regulation network was constructed by Cytoscape. The yellow rhombuses represent sRNAs, t...
<p><b>A</b>. <i>Copia3-LTR</i> 21 nt sRNAs in <i>PiDcl1</i> (D1t7, D1t8) and <i>PiRnh5</i> (D2t1) si...
<p>(A to L) show 21-24-nt sRNAs that regulate protein-coding gene expression [(A), (D), (G) and (J)]...
<p>This figure shows the count distribution of all aligned reads on the reference rDNA sequence (Gen...
<p>Blue lines show the number of 5′ RACE reads mapped to respective genome, while red lines show the...
<p>tRNAs genes were excluded from the gene counts. We also calculated the total length of these regi...
<p>Groups of genes were identified, each with a significantly high use of one of 61 codons. Within e...
<p>(A) Genome browser view depicting the concordant and discordant coverage of the control (blue) an...
<p>(A) ECDF plots (B) Graphic display. Arrows mark Ty1 insertion sites at nucleosome-occupied positi...
<p>(A) Genome browser shot of an <i>rdrp</i>-dependent <i>dicer</i>-independent sRNA-producing locus...
<p>Pie graphs for total reads (A) and unique reads (B) are showing the relative abundance of sRNAs l...
<p>A. Size distribution of sequencing reads mapping to L1_Tf elements in <i>Dcr</i><sup>−/−</sup> co...
<p>(A) Schematic representation of the position in which sRNAs mapped to the selected genes. Each ba...
<p><sup>a</sup>Total number of loci (with normalized abundance of more than 50 reads per million) sh...
<p>The transcriptional start and stop sites of candidate sRNAs were determined by circular RACE. The...
<p>The sRNA regulation network was constructed by Cytoscape. The yellow rhombuses represent sRNAs, t...
<p><b>A</b>. <i>Copia3-LTR</i> 21 nt sRNAs in <i>PiDcl1</i> (D1t7, D1t8) and <i>PiRnh5</i> (D2t1) si...
<p>(A to L) show 21-24-nt sRNAs that regulate protein-coding gene expression [(A), (D), (G) and (J)]...
<p>This figure shows the count distribution of all aligned reads on the reference rDNA sequence (Gen...
<p>Blue lines show the number of 5′ RACE reads mapped to respective genome, while red lines show the...
<p>tRNAs genes were excluded from the gene counts. We also calculated the total length of these regi...
<p>Groups of genes were identified, each with a significantly high use of one of 61 codons. Within e...
<p>(A) Genome browser view depicting the concordant and discordant coverage of the control (blue) an...
<p>(A) ECDF plots (B) Graphic display. Arrows mark Ty1 insertion sites at nucleosome-occupied positi...