Selected genes with differential sRNA abundance.

<p>(A) Schematic representation of the position in which sRNAs mapped to the selected genes. Each bar represents the abundance and position of sRNAs mapped to the gene. Small RNAs of 19-22nt (blue bars) and 23-26nt (red bars) are represented. (B) qRT-PCR analysis of mRNAs of selected genes at 2 and 4dpi for TMV-Cg and ORMV-infected plants compared to mock inoculated. Log2 fold change of selected genes at 2 and 4dpi are shown. Errors bars represent SE. * = 0.01≤p≤0.05; ** = 0.001≤p≤0.01. AT5G41740 (LRR1) and AT4G33300 (ADR1) are members of LRRs families; AT1G50440 (E3 RING1) and AT1G11270 (E3 SCF2) are members of E3 ligases families. AT3G43990 (BAH) is a putative transcription regulator. UBQ5 gene was used as a negative control displaying no sRNAs associated and no differential transcript accumulation compared to EF1alpha housekeeping gene.