Additional file 3: Table S1. of Estimation of genetic parameters and detection of chromosomal regions affecting the major milk proteins and their post translational modifications in Danish Holstein and Danish Jersey cattle

Additional file 1: of Genome-wide association analysis of milk yield traits in Nordic Red Cattle using imputed whole genome sequence variants

T. Iso-Touru (3409142)
G. Sahana (3409136)
B. Guldbrandtsen (3409133)
M. Lund (3409139)
J. Vilkki (3409145)

March 2016

List of variations tested by fixing the effect of the variation in question. (TXT 226 bytes

Additional file 3: of A genome-wide association study reveals specific transferases as candidate loci for bovine milk oligosaccharides synthesis

Nina Poulsen (3585842)
Randall Robinson (4216726)
Daniela Barile (561540)
Lotte Larsen (3585839)
Bart Buitenhuis (3404813)

May 2019

Figure S3. QQ-plots of P-values for milk oligosaccharides in Danish Holstein. (PDF 713 kb

Additional file 2: Table S1. of Genome-wide association study for female fertility in Nordic Red cattle

Johanna Höglund (3512930)
Bart Buitenhuis (3404813)
Bernt Guldbrandtsen (340532)
Mogens Lund (3512933)
Goutam Sahana (126076)

September 2015

SNPs significantly associated with Fertility index in the Nordic Red Cattle. A genome wide associati...

Additional file 4: Table S2. of Estimation of genetic parameters and detection of chromosomal regions affecting the major milk proteins and their post translational modifications in Danish Holstein and Danish Jersey cattle

Bart Buitenhuis (3404813)
Nina Poulsen (3585842)
Grum Gebreyesus (3585836)
Lotte Larsen (3585839)

August 2016

Significant SNP markers (FDR < 0.10) for the major milk proteins and their post translational modifi...

Additional file 1: Figure S1. of Estimation of genetic parameters and detection of chromosomal regions affecting the major milk proteins and their post translational modifications in Danish Holstein and Danish Jersey cattle

Bart Buitenhuis (3404813)
Nina Poulsen (3585842)
Grum Gebreyesus (3585836)
Lotte Larsen (3585839)

August 2016

Linkage disequilibrium plot (r2) of the DGAT region in the Danish Holstein breed. (PNG 357 kb

Additional file 5: Figure S3. of Estimation of genetic parameters and detection of chromosomal regions affecting the major milk proteins and their post translational modifications in Danish Holstein and Danish Jersey cattle

Bart Buitenhuis (3404813)
Nina Poulsen (3585842)
Grum Gebreyesus (3585836)
Lotte Larsen (3585839)

August 2016

Manhattan plot for protein % for the within breed analysis (black and grey closed dots: Danish Holst...

Additional file 9: Figure S7. of Estimation of genetic parameters and detection of chromosomal regions affecting the major milk proteins and their post translational modifications in Danish Holstein and Danish Jersey cattle

Bart Buitenhuis (3404813)
Nina Poulsen (3585842)
Grum Gebreyesus (3585836)
Lotte Larsen (3585839)

August 2016

Manhattan plot for β-LG% for the within breed analysis (black and grey closed dots: Danish Holstein;...

Additional file 8: Figure S6. of Estimation of genetic parameters and detection of chromosomal regions affecting the major milk proteins and their post translational modifications in Danish Holstein and Danish Jersey cattle

Bart Buitenhuis (3404813)
Nina Poulsen (3585842)
Grum Gebreyesus (3585836)
Lotte Larsen (3585839)

August 2016

Manhattan plot for k-CN% for the within breed analysis (black and grey closed dots: Danish Holstein;...

Additional file 6: Figure S4. of Estimation of genetic parameters and detection of chromosomal regions affecting the major milk proteins and their post translational modifications in Danish Holstein and Danish Jersey cattle

Bart Buitenhuis (3404813)
Nina Poulsen (3585842)
Grum Gebreyesus (3585836)
Lotte Larsen (3585839)

August 2016

Manhattan plot for casein % for the within breed analysis (black and grey closed dots: Danish Holste...

Additional file 7: Figure S5. of Estimation of genetic parameters and detection of chromosomal regions affecting the major milk proteins and their post translational modifications in Danish Holstein and Danish Jersey cattle

Bart Buitenhuis (3404813)
Nina Poulsen (3585842)
Grum Gebreyesus (3585836)
Lotte Larsen (3585839)

August 2016

Manhattan plot for αS2-CN% for the within breed analysis (black and grey closed dots: Danish Holstei...

Additional file 3: Table S1. of Genome-wide association for milk production and female fertility traits in Canadian dairy Holstein cattle

Shadi Nayeri (3446561)
Mehdi Sargolzaei (551369)
Mohammed Abo-Ismail (3446567)
Natalie May (3446564)
Stephen Miller (2182676)
Flavio Schenkel (598286)
Stephen Moore (233604)
Paul Stothard (5814)

June 2016

Excel file describing highly significant SNPs (genome-wise FDR ≤ 5 %, FDR ≤ 1% and genome-wise Bonfe...

Additional file 3: of Genome-wide association analysis of milk yield traits in Nordic Red Cattle using imputed whole genome sequence variants

T. Iso-Touru (3409142)
G. Sahana (3409136)
B. Guldbrandtsen (3409133)
M. Lund (3409139)
J. Vilkki (3409145)

March 2016

SNPs with Bonferroni corrected p-values higher than 0.05 (−log10(p) ≥ 8.50) for the milk yield. Colu...

Additional file 3: Figure S3. of The patterns of genomic variances and covariances across genome for milk production traits between Chinese and Nordic Holstein populations

Xiujin Li (2160691)
Mogens Lund (3512933)
Luc Janss (184049)
Chonglong Wang (3584984)
Xiangdong Ding (122577)
Qin Zhang (58638)
Guosheng Su (307770)

March 2017

Distribution of proportions of genomic variances explained by chromosome regions of 100 SNP for thre...

Additional file 2: of Genome-wide association analysis of milk yield traits in Nordic Red Cattle using imputed whole genome sequence variants

T. Iso-Touru (3409142)
G. Sahana (3409136)
B. Guldbrandtsen (3409133)
M. Lund (3409139)
J. Vilkki (3409145)

March 2016

SNPs with Bonferroni corrected p-values higher than 0.05 (−log10(p) ≥ 8.50) for the fat yield. Colum...

Additional file 2: of A genome-wide association study reveals specific transferases as candidate loci for bovine milk oligosaccharides synthesis

Nina Poulsen (3585842)
Randall Robinson (4216726)
Daniela Barile (561540)
Lotte Larsen (3585839)
Bart Buitenhuis (3404813)

May 2019

Table S2. Significant SNP markers (FDRâ<â0.10) for milk oligosaccharides for Danish Jersey. (TXT...

Additional file 1: of Genome-wide association analysis of milk yield traits in Nordic Red Cattle using imputed whole genome sequence variants

T. Iso-Touru (3409142)
G. Sahana (3409136)
B. Guldbrandtsen (3409133)
M. Lund (3409139)
J. Vilkki (3409145)

March 2016

List of variations tested by fixing the effect of the variation in question. (TXT 226 bytes

Additional file 3: of A genome-wide association study reveals specific transferases as candidate loci for bovine milk oligosaccharides synthesis

Nina Poulsen (3585842)
Randall Robinson (4216726)
Daniela Barile (561540)
Lotte Larsen (3585839)
Bart Buitenhuis (3404813)

May 2019

Figure S3. QQ-plots of P-values for milk oligosaccharides in Danish Holstein. (PDF 713 kb

Additional file 2: Table S1. of Genome-wide association study for female fertility in Nordic Red cattle

Johanna Höglund (3512930)
Bart Buitenhuis (3404813)
Bernt Guldbrandtsen (340532)
Mogens Lund (3512933)
Goutam Sahana (126076)

September 2015

SNPs significantly associated with Fertility index in the Nordic Red Cattle. A genome wide associati...

Additional file 4: Table S2. of Estimation of genetic parameters and detection of chromosomal regions affecting the major milk proteins and their post translational modifications in Danish Holstein and Danish Jersey cattle

Bart Buitenhuis (3404813)
Nina Poulsen (3585842)
Grum Gebreyesus (3585836)
Lotte Larsen (3585839)

August 2016

Significant SNP markers (FDR < 0.10) for the major milk proteins and their post translational modifi...

Additional file 1: Figure S1. of Estimation of genetic parameters and detection of chromosomal regions affecting the major milk proteins and their post translational modifications in Danish Holstein and Danish Jersey cattle

Bart Buitenhuis (3404813)
Nina Poulsen (3585842)
Grum Gebreyesus (3585836)
Lotte Larsen (3585839)

August 2016

Linkage disequilibrium plot (r2) of the DGAT region in the Danish Holstein breed. (PNG 357 kb

Additional file 5: Figure S3. of Estimation of genetic parameters and detection of chromosomal regions affecting the major milk proteins and their post translational modifications in Danish Holstein and Danish Jersey cattle

Bart Buitenhuis (3404813)
Nina Poulsen (3585842)
Grum Gebreyesus (3585836)
Lotte Larsen (3585839)

August 2016

Manhattan plot for protein % for the within breed analysis (black and grey closed dots: Danish Holst...

Additional file 9: Figure S7. of Estimation of genetic parameters and detection of chromosomal regions affecting the major milk proteins and their post translational modifications in Danish Holstein and Danish Jersey cattle

Bart Buitenhuis (3404813)
Nina Poulsen (3585842)
Grum Gebreyesus (3585836)
Lotte Larsen (3585839)

August 2016

Manhattan plot for β-LG% for the within breed analysis (black and grey closed dots: Danish Holstein;...

Additional file 8: Figure S6. of Estimation of genetic parameters and detection of chromosomal regions affecting the major milk proteins and their post translational modifications in Danish Holstein and Danish Jersey cattle

Bart Buitenhuis (3404813)
Nina Poulsen (3585842)
Grum Gebreyesus (3585836)
Lotte Larsen (3585839)

August 2016

Manhattan plot for k-CN% for the within breed analysis (black and grey closed dots: Danish Holstein;...

Additional file 6: Figure S4. of Estimation of genetic parameters and detection of chromosomal regions affecting the major milk proteins and their post translational modifications in Danish Holstein and Danish Jersey cattle

Bart Buitenhuis (3404813)
Nina Poulsen (3585842)
Grum Gebreyesus (3585836)
Lotte Larsen (3585839)

August 2016

Manhattan plot for casein % for the within breed analysis (black and grey closed dots: Danish Holste...

Additional file 7: Figure S5. of Estimation of genetic parameters and detection of chromosomal regions affecting the major milk proteins and their post translational modifications in Danish Holstein and Danish Jersey cattle

Bart Buitenhuis (3404813)
Nina Poulsen (3585842)
Grum Gebreyesus (3585836)
Lotte Larsen (3585839)

August 2016

Manhattan plot for αS2-CN% for the within breed analysis (black and grey closed dots: Danish Holstei...

Additional file 3: Table S1. of Genome-wide association for milk production and female fertility traits in Canadian dairy Holstein cattle

Shadi Nayeri (3446561)
Mehdi Sargolzaei (551369)
Mohammed Abo-Ismail (3446567)
Natalie May (3446564)
Stephen Miller (2182676)
Flavio Schenkel (598286)
Stephen Moore (233604)
Paul Stothard (5814)

June 2016

Excel file describing highly significant SNPs (genome-wise FDR ≤ 5 %, FDR ≤ 1% and genome-wise Bonfe...

Additional file 3: of Genome-wide association analysis of milk yield traits in Nordic Red Cattle using imputed whole genome sequence variants

T. Iso-Touru (3409142)
G. Sahana (3409136)
B. Guldbrandtsen (3409133)
M. Lund (3409139)
J. Vilkki (3409145)

March 2016

SNPs with Bonferroni corrected p-values higher than 0.05 (−log10(p) ≥ 8.50) for the milk yield. Colu...

Additional file 3: Figure S3. of The patterns of genomic variances and covariances across genome for milk production traits between Chinese and Nordic Holstein populations

Xiujin Li (2160691)
Mogens Lund (3512933)
Luc Janss (184049)
Chonglong Wang (3584984)
Xiangdong Ding (122577)
Qin Zhang (58638)
Guosheng Su (307770)

March 2017

Distribution of proportions of genomic variances explained by chromosome regions of 100 SNP for thre...

Additional file 2: of Genome-wide association analysis of milk yield traits in Nordic Red Cattle using imputed whole genome sequence variants

T. Iso-Touru (3409142)
G. Sahana (3409136)
B. Guldbrandtsen (3409133)
M. Lund (3409139)
J. Vilkki (3409145)

March 2016

SNPs with Bonferroni corrected p-values higher than 0.05 (−log10(p) ≥ 8.50) for the fat yield. Colum...

Additional file 2: of A genome-wide association study reveals specific transferases as candidate loci for bovine milk oligosaccharides synthesis

Nina Poulsen (3585842)
Randall Robinson (4216726)
Daniela Barile (561540)
Lotte Larsen (3585839)
Bart Buitenhuis (3404813)

May 2019

Table S2. Significant SNP markers (FDRâ<â0.10) for milk oligosaccharides for Danish Jersey. (TXT...

Additional file 1: of Genome-wide association analysis of milk yield traits in Nordic Red Cattle using imputed whole genome sequence variants

T. Iso-Touru (3409142)
G. Sahana (3409136)
B. Guldbrandtsen (3409133)
M. Lund (3409139)
J. Vilkki (3409145)

March 2016

List of variations tested by fixing the effect of the variation in question. (TXT 226 bytes

Additional file 3: of A genome-wide association study reveals specific transferases as candidate loci for bovine milk oligosaccharides synthesis

Nina Poulsen (3585842)
Randall Robinson (4216726)
Daniela Barile (561540)
Lotte Larsen (3585839)
Bart Buitenhuis (3404813)

May 2019

Figure S3. QQ-plots of P-values for milk oligosaccharides in Danish Holstein. (PDF 713 kb

Additional file 2: Table S1. of Genome-wide association study for female fertility in Nordic Red cattle

Johanna Höglund (3512930)
Bart Buitenhuis (3404813)
Bernt Guldbrandtsen (340532)
Mogens Lund (3512933)
Goutam Sahana (126076)

September 2015

SNPs significantly associated with Fertility index in the Nordic Red Cattle. A genome wide associati...

Additional file 3: Table S1. of Estimation of genetic parameters and detection of chromosomal regions affecting the major milk proteins and their post translational modifications in Danish Holstein and Danish Jersey cattle

Abstract

Extracted data

Additional file 3: Table S1. of Estimation of genetic parameters and detection of chromosomal regions affecting the major milk proteins and their post translational modifications in Danish Holstein and Danish Jersey cattle

Abstract

Extracted data

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