First BridgeDb Java release funded by the NWO Open Grant (203.001.121), aimed at making the build process more robust (and adding a new developer). It updates a number of dependencies (Apache Velocity, Apache Derby, JUnit, Log4j, and MySQL driver) and add the first bits of Bioregistry.io support. This release also removes the BridgeDb Webservice, which is now available from a separate GitHub repository. The Xref.toString() now returns whether the identifier is primary or not, which is now also retrieved from the Derby database. It also update to the BridgeDb Datasources 20220526 release, which includes the Bioregistry prefixes for all data sources. The below examples assume you need just org.bridgedb.bio, and you can use it as template and ...
BridgeDb v2.2.1 is a minor bug fix release since v2.2.0. Fixes: IDMapperUniprot does not follow rel...
Major BridgeDb release, to be picked up by all downstream projects and users. The changes include mo...
Minor release that adds new a data source (VMH metabolite), backports the /xrefsBatch/ webservice AP...
Second BridgeDb Java release funded by the NWO Open Grant (203.001.121). It adds Bioregistry.io supp...
First public release of BridgeDb 3.0, a major version upgrade. It includes all the many small update...
Release that updates BridgeDb to version 3.0.15 with Bioregistry.io and primary/secondary identifier...
First public release of BridgeDb 3.0, a major version upgrade. It includes all the many small update...
ChangeLog 2.0.0 (2014-11-21) Added the upcoming 10 alphanum ID format for Uniprot, see http://www...
ChangeLog 2.1.0 (2015-08-06) Update SwissLipids, BRENDA and wikidata Update InChiKey to PRIMARY id...
This release updates a few dependencies, including jaxws-ri, log4j, and org.apache.cxf. The below e...
This release updates the URL patterns for the CAS database, adds Brassica napus as species, outputs ...
Major release tweaking the JSON output, fixes the returning of identifiers in the/xrefBatch/$DataSou...
This minor release adds PubMed and DOI as identifier sources. The below examples assume you need jus...
This larger minor release updates removes the Ant build system, and can now generate OSGi bundles wi...
This minor release adds Guide to Pharmacology Targets as identifier sources. The below examples assu...
BridgeDb v2.2.1 is a minor bug fix release since v2.2.0. Fixes: IDMapperUniprot does not follow rel...
Major BridgeDb release, to be picked up by all downstream projects and users. The changes include mo...
Minor release that adds new a data source (VMH metabolite), backports the /xrefsBatch/ webservice AP...
Second BridgeDb Java release funded by the NWO Open Grant (203.001.121). It adds Bioregistry.io supp...
First public release of BridgeDb 3.0, a major version upgrade. It includes all the many small update...
Release that updates BridgeDb to version 3.0.15 with Bioregistry.io and primary/secondary identifier...
First public release of BridgeDb 3.0, a major version upgrade. It includes all the many small update...
ChangeLog 2.0.0 (2014-11-21) Added the upcoming 10 alphanum ID format for Uniprot, see http://www...
ChangeLog 2.1.0 (2015-08-06) Update SwissLipids, BRENDA and wikidata Update InChiKey to PRIMARY id...
This release updates a few dependencies, including jaxws-ri, log4j, and org.apache.cxf. The below e...
This release updates the URL patterns for the CAS database, adds Brassica napus as species, outputs ...
Major release tweaking the JSON output, fixes the returning of identifiers in the/xrefBatch/$DataSou...
This minor release adds PubMed and DOI as identifier sources. The below examples assume you need jus...
This larger minor release updates removes the Ant build system, and can now generate OSGi bundles wi...
This minor release adds Guide to Pharmacology Targets as identifier sources. The below examples assu...
BridgeDb v2.2.1 is a minor bug fix release since v2.2.0. Fixes: IDMapperUniprot does not follow rel...
Major BridgeDb release, to be picked up by all downstream projects and users. The changes include mo...
Minor release that adds new a data source (VMH metabolite), backports the /xrefsBatch/ webservice AP...