Publication date
November 2020
DOIAbstract
Generalize the OWL parser to serialization formats that are different from the PathwayCommons conventions (e.g., the PhosphoSitePlus BioPAX export)
Generalize the OWL parser to serialization formats that are different from the PathwayCommons conventions (e.g., the PhosphoSitePlus BioPAX export)
What's Changed FIX: export name by @sappelhoff in https://github.com/bids-standard/pybv/pull/90 Fu...
MX are sometime hard to use. Biorbd has an actual Python interface, but was not so much convenient. ...
Summary: BioPAX is a community-developed standard language for biological pathway data. A key functi...
Initial release containing An implementation of Python classes representing each BioPAX object type...
Allow using custom encoding when processing OWL Migrate testing from Travis to GitHub Action
Export the correct custom XML-base name space associated with a model when serializing into OW
Improve the BioPAX object model by implementing Xreffable, Named and Observable as mixin classes. Im...
What's Changed Add py.typed by @bgyori in https://github.com/indralab/pybiopax/pull/45 Add global t...
What's Changed Add attributes to NucleicAcid reference BioPAX classes by @bgyori in https://github....
Implement several BioPAX L3 classes that the previous version missed Various bug fixes in class inhe...
What's Changed Add functions to get database references from a model by @bgyori in https://github.c...
Biological Pathway Exchange (BioPAX) is a standard language to represent biological pathways at the ...
Summary: BioPAX is a community developed standard language for biological pathway data. A key functi...
In June 2003, the Department of Energy (DOE) allocated funds in support of the development of A Data...
In July 2004, the Department of Energy (DOE) allocated funds in support of the development of A Data...
What's Changed FIX: export name by @sappelhoff in https://github.com/bids-standard/pybv/pull/90 Fu...
MX are sometime hard to use. Biorbd has an actual Python interface, but was not so much convenient. ...
Summary: BioPAX is a community-developed standard language for biological pathway data. A key functi...
Initial release containing An implementation of Python classes representing each BioPAX object type...
Allow using custom encoding when processing OWL Migrate testing from Travis to GitHub Action
Export the correct custom XML-base name space associated with a model when serializing into OW
Improve the BioPAX object model by implementing Xreffable, Named and Observable as mixin classes. Im...
What's Changed Add py.typed by @bgyori in https://github.com/indralab/pybiopax/pull/45 Add global t...
What's Changed Add attributes to NucleicAcid reference BioPAX classes by @bgyori in https://github....
Implement several BioPAX L3 classes that the previous version missed Various bug fixes in class inhe...
What's Changed Add functions to get database references from a model by @bgyori in https://github.c...
Biological Pathway Exchange (BioPAX) is a standard language to represent biological pathways at the ...
Summary: BioPAX is a community developed standard language for biological pathway data. A key functi...
In June 2003, the Department of Energy (DOE) allocated funds in support of the development of A Data...
In July 2004, the Department of Energy (DOE) allocated funds in support of the development of A Data...
What's Changed FIX: export name by @sappelhoff in https://github.com/bids-standard/pybv/pull/90 Fu...
MX are sometime hard to use. Biorbd has an actual Python interface, but was not so much convenient. ...
Summary: BioPAX is a community-developed standard language for biological pathway data. A key functi...
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