Python General improvements to SBML import (#1312, #1316, #1315, #1322 , #1324 #1333, #1329) Small bugfixes and improvements (#1321 ) Improve derivative computation for instances of power (#1320 ) C++ Fix FIM and residual computation for models with parameter dependent sigma. (#1338) Disable chi2/residual/FIM computation for non-gaussian objective functions. (#1338) Bugfix for integration failure during adjoint solve (#1327) Doc Update references (#1331, #1336) CI Update OpenBLAS for windows (#1334
Fixed (re)initialization of sensitivities if ExpData::fixedParametersPreequilibration is set (#994) ...
Features: Python package: more flexible HDF5 library localization Extended CI: python tests, preequ...
Changes in this release: All: Updated / extended documentation Fix reuse of Solver instances (#541...
New features: Python model import now supports SBML Events (#1443) Implement support for compilatio...
Python Restore support for species references (#1358) Add support for noise models in pysb (#1360) ...
Python Improve and extend available objective functions (#1235) Fix processing of compartment defin...
Python Speed up model import, compilation (#1123, #1112) Improve/Add steady-state solver documentat...
Python Fix pysb-petab support (#1288) Fix ExpData constructor overloading (#1299) Fix support for p...
Features/enhancements: Check SBML model validity (#343) Allow per-parameter setting of amioptions::...
Bugfixes: fixes a critical bug in the newton solver fixes multiple bugs in sbml import for degenera...
Features / improvements: Speedup symbolic processing for ODE generation in python Bugfixes: Fix(p...
Features More efficient handling of splines in SBML models by @paulstapor, @lcontento, @dweindl in ...
Breaking changes: AMICI requires Python>=3.7 Updated package installation (PEP517/518): Creating s...
[python] Added numpy and python wrappers that provide a more user friendly python API [python] Enabl...
Python: Don't require use of ModelPtr.get to call ExpData(Model) Fix import in generated model Pyth...
Fixed (re)initialization of sensitivities if ExpData::fixedParametersPreequilibration is set (#994) ...
Features: Python package: more flexible HDF5 library localization Extended CI: python tests, preequ...
Changes in this release: All: Updated / extended documentation Fix reuse of Solver instances (#541...
New features: Python model import now supports SBML Events (#1443) Implement support for compilatio...
Python Restore support for species references (#1358) Add support for noise models in pysb (#1360) ...
Python Improve and extend available objective functions (#1235) Fix processing of compartment defin...
Python Speed up model import, compilation (#1123, #1112) Improve/Add steady-state solver documentat...
Python Fix pysb-petab support (#1288) Fix ExpData constructor overloading (#1299) Fix support for p...
Features/enhancements: Check SBML model validity (#343) Allow per-parameter setting of amioptions::...
Bugfixes: fixes a critical bug in the newton solver fixes multiple bugs in sbml import for degenera...
Features / improvements: Speedup symbolic processing for ODE generation in python Bugfixes: Fix(p...
Features More efficient handling of splines in SBML models by @paulstapor, @lcontento, @dweindl in ...
Breaking changes: AMICI requires Python>=3.7 Updated package installation (PEP517/518): Creating s...
[python] Added numpy and python wrappers that provide a more user friendly python API [python] Enabl...
Python: Don't require use of ModelPtr.get to call ExpData(Model) Fix import in generated model Pyth...
Fixed (re)initialization of sensitivities if ExpData::fixedParametersPreequilibration is set (#994) ...
Features: Python package: more flexible HDF5 library localization Extended CI: python tests, preequ...
Changes in this release: All: Updated / extended documentation Fix reuse of Solver instances (#541...