update to gtdb version file download (handled by helper program gtt-check-or-setup-GTDB-files) to coincide with their switch from "VERSION" to "VERSION.txt" (thanks to https://github.com/AstrobioMike/GToTree/issues/72
updating gtt-get-accessions-from-GTDB https://github.com/AstrobioMike/GToTree/commit/bbaec5893342e05...
added in check for special characters in user-provided mapping file, re: https://github.com/Astrobio...
updated gtt-genbank-to-AA-seqs to handle those without locus_tags improved gtt-gen-iToL-ma
update to gtdb version file download to coincide with their switch from "VERSION" to "VERSION.txt" (...
sigh, within-program version needed to be bumped along with last changes and i haven't yet figured o...
fixing version disparity because i can never remember to update it with changes before release – i k...
adding gtt-update-ncbi-taxonomy helper script to be able to easily keep the db up-to-date for use wi...
added comprehensive helper program gtt-get-accessions-from-GTDB to facilitate accessing and utilizin...
Initial release of GToTree! Codebase: https://github.com/AstrobioMike/GToTree Documentation: https:/...
minor bug fixes; additional output report added Codebase: https://github.com/AstrobioMike/GToTree ...
incrementing version following some conda meta.yaml adjustments, as it seems to have led to a proble...
improvements to working with GTDB (in main script and in gtt-get-accessions-from-GTDB) improvements ...
removing conda version check from conda-setup.sh script for now Codebase: https://github.com/Astrobi...
minor bug fixes Codebase: https://github.com/AstrobioMike/GToTree Documentation: https://github.co...
fix for conda version check fix for shell-environment localization variables in conda gtotree enviro...
updating gtt-get-accessions-from-GTDB https://github.com/AstrobioMike/GToTree/commit/bbaec5893342e05...
added in check for special characters in user-provided mapping file, re: https://github.com/Astrobio...
updated gtt-genbank-to-AA-seqs to handle those without locus_tags improved gtt-gen-iToL-ma
update to gtdb version file download to coincide with their switch from "VERSION" to "VERSION.txt" (...
sigh, within-program version needed to be bumped along with last changes and i haven't yet figured o...
fixing version disparity because i can never remember to update it with changes before release – i k...
adding gtt-update-ncbi-taxonomy helper script to be able to easily keep the db up-to-date for use wi...
added comprehensive helper program gtt-get-accessions-from-GTDB to facilitate accessing and utilizin...
Initial release of GToTree! Codebase: https://github.com/AstrobioMike/GToTree Documentation: https:/...
minor bug fixes; additional output report added Codebase: https://github.com/AstrobioMike/GToTree ...
incrementing version following some conda meta.yaml adjustments, as it seems to have led to a proble...
improvements to working with GTDB (in main script and in gtt-get-accessions-from-GTDB) improvements ...
removing conda version check from conda-setup.sh script for now Codebase: https://github.com/Astrobi...
minor bug fixes Codebase: https://github.com/AstrobioMike/GToTree Documentation: https://github.co...
fix for conda version check fix for shell-environment localization variables in conda gtotree enviro...
updating gtt-get-accessions-from-GTDB https://github.com/AstrobioMike/GToTree/commit/bbaec5893342e05...
added in check for special characters in user-provided mapping file, re: https://github.com/Astrobio...
updated gtt-genbank-to-AA-seqs to handle those without locus_tags improved gtt-gen-iToL-ma
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