xPore is a Python package for identification and quantification of differential RNA modifications from direct RNA sequencing. The detailed usage is documented at https://xpore.readthedocs.io/en/latest, while all scripts and source code are available at https://github.com/GoekeLab/xpore. All the preprocessed datasets used in the paper are provided here. Please cite our paper below when using these data. Ploy N. Pratanwanich et al. "Detection of differential RNA modifications from direct RNA sequencing of human cell lines." bioRxiv (2020)
RNA molecules undergo a vast array of chemical post-transcriptional modifications (PTMs) that can af...
Post-transcriptional RNA modifications are involved in a range of important cellular processes, incl...
This record contains raw data related to the article “Evaluation of Oxford Nanopore MinION RNA-seq p...
xPore is a Python package for identification and quantification of differential RNA modifications fr...
xPore is a Python package for identification and quantification of differential RNA modifications fr...
xPore is a Python package for identification and quantification of differential RNA modifications fr...
RNA molecules undergo a vast array of chemical post-transcriptional modifications (PTMs) that can af...
The covalent modification of RNA molecules is a pervasive feature of all classes of RNAs and has fun...
The catalytically active component of ribosomes, rRNA, is long studied and heavily modified. However...
Both DNA and RNA modifications play critical roles in cell regulation. Traditionally, a chemical sel...
The catalytically active component of ribosomes, rRNA, is long studied and heavily modified. However...
This work involves using native RNA nanopore sequencing to directly characterize the transcriptome o...
The direct RNA sequencing platform offered by Oxford Nanopore Technologies allows for direct measure...
RNA modifications exist in all kingdom of life. Several different types of base or ribose modificati...
This work describes advances in nanopore sequencing technology as they apply to RNA. RNAs in the cel...
RNA molecules undergo a vast array of chemical post-transcriptional modifications (PTMs) that can af...
Post-transcriptional RNA modifications are involved in a range of important cellular processes, incl...
This record contains raw data related to the article “Evaluation of Oxford Nanopore MinION RNA-seq p...
xPore is a Python package for identification and quantification of differential RNA modifications fr...
xPore is a Python package for identification and quantification of differential RNA modifications fr...
xPore is a Python package for identification and quantification of differential RNA modifications fr...
RNA molecules undergo a vast array of chemical post-transcriptional modifications (PTMs) that can af...
The covalent modification of RNA molecules is a pervasive feature of all classes of RNAs and has fun...
The catalytically active component of ribosomes, rRNA, is long studied and heavily modified. However...
Both DNA and RNA modifications play critical roles in cell regulation. Traditionally, a chemical sel...
The catalytically active component of ribosomes, rRNA, is long studied and heavily modified. However...
This work involves using native RNA nanopore sequencing to directly characterize the transcriptome o...
The direct RNA sequencing platform offered by Oxford Nanopore Technologies allows for direct measure...
RNA modifications exist in all kingdom of life. Several different types of base or ribose modificati...
This work describes advances in nanopore sequencing technology as they apply to RNA. RNAs in the cel...
RNA molecules undergo a vast array of chemical post-transcriptional modifications (PTMs) that can af...
Post-transcriptional RNA modifications are involved in a range of important cellular processes, incl...
This record contains raw data related to the article “Evaluation of Oxford Nanopore MinION RNA-seq p...