Bugs and improvements Addresses issue of incomplete retrieval of taxonomy data from NCBI Process of retrieving taxonomy data is faster PR #113 What's Changed add not on cw_get_uniprot before cw_get_pdb by @HobnobMancer in https://github.com/HobnobMancer/cazy_webscraper/pull/112 Add batch ncbi tax by @HobnobMancer in https://github.com/HobnobMancer/cazy_webscraper/pull/113 Full Changelog: https://github.com/HobnobMancer/cazy_webscraper/compare/v2.2.7...v2.2.
What's Changed Add fam seq analysis by @HobnobMancer in https://github.com/HobnobMancer/cazomevolve/...
What's Changed Fix logger by @HobnobMancer in https://github.com/HobnobMancer/cazy_webscraper/pull/...
Fix inability to parse Entrez.NotXMLError when retrieving protein sequences from NCBI. What's Change...
What's Changed Issue 111 + 112 uniprot by @HobnobMancer in https://github.com/HobnobMancer/cazy_web...
What's Changed New features Aility to retrieve the latest taxonomic classifications from NCBI Upda...
What's Changed Add getting GTDB taxonomic classifications by @HobnobMancer in https://github.com/Ho...
What's Changed Pull Requests Trouble shoot uniprot by @HobnobMancer in https://github.com/HobnobMan...
What's New Retrieve the latest taxonomic information from NCBI Retrieve complete taxonomic lineages ...
Summary Fixed incomplete retrieval of proteins from the local CAZyme database that match the specif...
Address issue #100 with failing to retrieve data from UniProt, owing to changes to the UniProt API. ...
Fixing bugs when downloading seqs from NCBI: Issue #109 Adding missing args to func calls Accept U...
What's Changed Issue 99 by @HobnobMancer in https://github.com/HobnobMancer/cazy_webscraper/pull/10...
Fix cazy_webscraper crashing from missing arguments to function calls when retrieving the latest tax...
Fix import error when retrieving protein sequences from NCBI, that was introduced in version 2.2.4 W...
v2.0.3 Beta release of version 2. Bug fixes Fixes making only the parent dirs of an output database...
What's Changed Add fam seq analysis by @HobnobMancer in https://github.com/HobnobMancer/cazomevolve/...
What's Changed Fix logger by @HobnobMancer in https://github.com/HobnobMancer/cazy_webscraper/pull/...
Fix inability to parse Entrez.NotXMLError when retrieving protein sequences from NCBI. What's Change...
What's Changed Issue 111 + 112 uniprot by @HobnobMancer in https://github.com/HobnobMancer/cazy_web...
What's Changed New features Aility to retrieve the latest taxonomic classifications from NCBI Upda...
What's Changed Add getting GTDB taxonomic classifications by @HobnobMancer in https://github.com/Ho...
What's Changed Pull Requests Trouble shoot uniprot by @HobnobMancer in https://github.com/HobnobMan...
What's New Retrieve the latest taxonomic information from NCBI Retrieve complete taxonomic lineages ...
Summary Fixed incomplete retrieval of proteins from the local CAZyme database that match the specif...
Address issue #100 with failing to retrieve data from UniProt, owing to changes to the UniProt API. ...
Fixing bugs when downloading seqs from NCBI: Issue #109 Adding missing args to func calls Accept U...
What's Changed Issue 99 by @HobnobMancer in https://github.com/HobnobMancer/cazy_webscraper/pull/10...
Fix cazy_webscraper crashing from missing arguments to function calls when retrieving the latest tax...
Fix import error when retrieving protein sequences from NCBI, that was introduced in version 2.2.4 W...
v2.0.3 Beta release of version 2. Bug fixes Fixes making only the parent dirs of an output database...
What's Changed Add fam seq analysis by @HobnobMancer in https://github.com/HobnobMancer/cazomevolve/...
What's Changed Fix logger by @HobnobMancer in https://github.com/HobnobMancer/cazy_webscraper/pull/...
Fix inability to parse Entrez.NotXMLError when retrieving protein sequences from NCBI. What's Change...
DOI
Add to ORKG