Fixed allele frequency biases that occurred due to missed evidence when investigating breakends. Fixed pattern-too-long error that occurred in some corner cases. Fixed error occurring when investigation breakends without event tag. These are skipped for now. Special handling will be added later
Bug Fixes fix bug in homopolymer error detection that has led to wrong homopolymer error calls. Thi...
Bug Fixes improved divindel bias estimation precision (getting rid of false negatives due to errone...
Features added ability to omit MAPQ adjustment for known variants (varlociraptor preprocess variant...
Added read position bias into model. Performance improvements for exploration of bias events. Fixed ...
Infer missing antisense breakends (sometimes callers only report one direction although the other is...
Bug Fixes temporarily disable performance optimization in realignment because it can lead to undere...
⚠ BREAKING CHANGES consider edit distance to alt allele, and infer additional third allele from rea...
Added SOBS field, showing simplified observations that omit all information but the alt allele evide...
Features adaptive integration (speeding up the evaluation of complex scenarios) (#199) (8043f94) B...
Features add divindel bias for detecting artifacts caused by diverging indels associated with the a...
Add softclip bias for detecting SNV or MNV artifacts induced by alignment issues (@johanneskoester)....
Bug Fixes fix insufficient data leading to probabilities of 0 leading to nulls in alignment propert...
Features by default, use prior to guard absence or presence of variant but weight all decisions abo...
Features better homopolymer error detection (#226) (b95d03d) eliminate false positives and false ne...
Bug Fixes do not skip haplotype determination if SVTYPE tag is not present in VCF (#295) (1c22f70
Bug Fixes fix bug in homopolymer error detection that has led to wrong homopolymer error calls. Thi...
Bug Fixes improved divindel bias estimation precision (getting rid of false negatives due to errone...
Features added ability to omit MAPQ adjustment for known variants (varlociraptor preprocess variant...
Added read position bias into model. Performance improvements for exploration of bias events. Fixed ...
Infer missing antisense breakends (sometimes callers only report one direction although the other is...
Bug Fixes temporarily disable performance optimization in realignment because it can lead to undere...
⚠ BREAKING CHANGES consider edit distance to alt allele, and infer additional third allele from rea...
Added SOBS field, showing simplified observations that omit all information but the alt allele evide...
Features adaptive integration (speeding up the evaluation of complex scenarios) (#199) (8043f94) B...
Features add divindel bias for detecting artifacts caused by diverging indels associated with the a...
Add softclip bias for detecting SNV or MNV artifacts induced by alignment issues (@johanneskoester)....
Bug Fixes fix insufficient data leading to probabilities of 0 leading to nulls in alignment propert...
Features by default, use prior to guard absence or presence of variant but weight all decisions abo...
Features better homopolymer error detection (#226) (b95d03d) eliminate false positives and false ne...
Bug Fixes do not skip haplotype determination if SVTYPE tag is not present in VCF (#295) (1c22f70
Bug Fixes fix bug in homopolymer error detection that has led to wrong homopolymer error calls. Thi...
Bug Fixes improved divindel bias estimation precision (getting rid of false negatives due to errone...
Features added ability to omit MAPQ adjustment for known variants (varlociraptor preprocess variant...
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