Infer missing antisense breakends (sometimes callers only report one direction although the other is necessary as well). Support for single breakends. Support for arbitrary replacements. Fixed a bug with posterior odds filtration leading to underestimation of the odds
Features by default, use prior to guard absence or presence of variant but weight all decisions abo...
Features added ability to omit MAPQ adjustment for known variants (varlociraptor preprocess variant...
Features adaptive integration (speeding up the evaluation of complex scenarios) (#199) (8043f94) B...
Fixed allele frequency biases that occurred due to missed evidence when investigating breakends. Fix...
Bug Fixes temporarily disable performance optimization in realignment because it can lead to undere...
Added read position bias into model. Performance improvements for exploration of bias events. Fixed ...
Bug Fixes improved divindel bias estimation precision (getting rid of false negatives due to errone...
Bug Fixes fix insufficient data leading to probabilities of 0 leading to nulls in alignment propert...
Fix odds filtering arguments. Improved error messages. Improved insert size estimation. Use htslib 1...
⚠ BREAKING CHANGES Rename estimate tmb subcommand into estimate mutational-burden (#182) Features ...
⚠ BREAKING CHANGES consider edit distance to alt allele, and infer additional third allele from rea...
Bug Fixes fixed bug causing NaN likelihoods when dealing with samples that do not contain any homop...
Bug Fixes constrain MAP estimates of AF to the most probable event (#311) (f52860b
Features better homopolymer error detection (#226) (b95d03d) eliminate false positives and false ne...
Features warn on missing ANN records in mutational burden estimation (#376) (32006fb) Bug Fixes I...
Features by default, use prior to guard absence or presence of variant but weight all decisions abo...
Features added ability to omit MAPQ adjustment for known variants (varlociraptor preprocess variant...
Features adaptive integration (speeding up the evaluation of complex scenarios) (#199) (8043f94) B...
Fixed allele frequency biases that occurred due to missed evidence when investigating breakends. Fix...
Bug Fixes temporarily disable performance optimization in realignment because it can lead to undere...
Added read position bias into model. Performance improvements for exploration of bias events. Fixed ...
Bug Fixes improved divindel bias estimation precision (getting rid of false negatives due to errone...
Bug Fixes fix insufficient data leading to probabilities of 0 leading to nulls in alignment propert...
Fix odds filtering arguments. Improved error messages. Improved insert size estimation. Use htslib 1...
⚠ BREAKING CHANGES Rename estimate tmb subcommand into estimate mutational-burden (#182) Features ...
⚠ BREAKING CHANGES consider edit distance to alt allele, and infer additional third allele from rea...
Bug Fixes fixed bug causing NaN likelihoods when dealing with samples that do not contain any homop...
Bug Fixes constrain MAP estimates of AF to the most probable event (#311) (f52860b
Features better homopolymer error detection (#226) (b95d03d) eliminate false positives and false ne...
Features warn on missing ANN records in mutational burden estimation (#376) (32006fb) Bug Fixes I...
Features by default, use prior to guard absence or presence of variant but weight all decisions abo...
Features added ability to omit MAPQ adjustment for known variants (varlociraptor preprocess variant...
Features adaptive integration (speeding up the evaluation of complex scenarios) (#199) (8043f94) B...
DOI
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