Motif id indicates ranks in the MEME output. Motifs are grouped based on overlapping hits in NLRs and similar sequence patterns. Established and proposed motif annotation labels are given where applicable. L is the motif length. #NLR and #nei. indicate number of sequences with a given motif in short N-termini of NLRs and C-termini of their genomic neighbors, respectively. AC+ indicates a proportion of motif instances for which ArchCandy score is 0.56 or above. Major taxonomic branch including vast majority of NLRs with the motif is given. #eff. indicates total number of effector proteins (with established association to NLRs) [5] with a given motif in C-termini. #cooc. indicates number of sequences with a given motif in short N-termini of N...
Abstract: Protein motifs, which are specific regions and conserved regions, are found by comparing m...
Informally. A regulatory motif is a nucleotide sequence widespread in DNA and conjectured to have so...
Linear motifs are short protein subsequences that mediate protein interactions. Hundreds of motif cl...
Clusters of N-termini containing sequences resembling bacterial amyloid signaling motifs were identi...
Comparative motif analysis using 400 bp upstream of the start codon as target sequence. The number o...
This dataset includes 20 supplementary data files for manuscript Exploring a diverse world of effect...
<p>(1) Given a set of protein sequences, (2) we enumerate all possible n-mers or motifs (3≤n≤12) pre...
a<p>The motifs were identified using MEME, had the most significant E-values of all motifs identifie...
Examination of a collection of over 80,000 Plant Nod-like receptors (NLRs) revealed an overwhelming ...
Five motifs were identified by MEME tools. On the left, a list of Ann proteins is listed. The variou...
Motivation: The goal of motif discovery is to detect novel, unknown, and important signals from biol...
<p>MEME motifs are represented by position-specific probability matrices that specify the probabilit...
MotifCluster finds related motifs in a set of sequences, and clusters the sequences into families us...
Examination of a collection of over 80,000 Plant Nod-like receptors (NLRs) revealed an overwhelming ...
Biological motifs are defined as overly recurring sub-patterns in biological systems. Sequence motif...
Abstract: Protein motifs, which are specific regions and conserved regions, are found by comparing m...
Informally. A regulatory motif is a nucleotide sequence widespread in DNA and conjectured to have so...
Linear motifs are short protein subsequences that mediate protein interactions. Hundreds of motif cl...
Clusters of N-termini containing sequences resembling bacterial amyloid signaling motifs were identi...
Comparative motif analysis using 400 bp upstream of the start codon as target sequence. The number o...
This dataset includes 20 supplementary data files for manuscript Exploring a diverse world of effect...
<p>(1) Given a set of protein sequences, (2) we enumerate all possible n-mers or motifs (3≤n≤12) pre...
a<p>The motifs were identified using MEME, had the most significant E-values of all motifs identifie...
Examination of a collection of over 80,000 Plant Nod-like receptors (NLRs) revealed an overwhelming ...
Five motifs were identified by MEME tools. On the left, a list of Ann proteins is listed. The variou...
Motivation: The goal of motif discovery is to detect novel, unknown, and important signals from biol...
<p>MEME motifs are represented by position-specific probability matrices that specify the probabilit...
MotifCluster finds related motifs in a set of sequences, and clusters the sequences into families us...
Examination of a collection of over 80,000 Plant Nod-like receptors (NLRs) revealed an overwhelming ...
Biological motifs are defined as overly recurring sub-patterns in biological systems. Sequence motif...
Abstract: Protein motifs, which are specific regions and conserved regions, are found by comparing m...
Informally. A regulatory motif is a nucleotide sequence widespread in DNA and conjectured to have so...
Linear motifs are short protein subsequences that mediate protein interactions. Hundreds of motif cl...