Using thermodynamic integration, we study the solvation free energy of 18 amino acid side chain equivalents in solvents with different polarities, ranging from the most polar water to the most non-polar cyclohexane. The amino acid side chain equivalents are obtained from the 20 natural amino acids by replacing the backbone part with a hydrogen atom, and discarding proline and glycine that have special properties. A detailed analysis of the relative solvation free energies suggests how it is possible to achieve a robust and unambiguous hydrophobic scale for the amino acids. By discriminating the relative contributions of the entropic and enthalpic terms, we find strong negative correlations in water and ethanol, associated with the well-know...
peer reviewedSolvation free energies of neutral amino acids in water and in chloroform were computed...
AbstractMost proteins perform their function in aqueous solution. The interactions with water determ...
While much is known about the properties of small organic molecules in aqueous solution, one quantit...
Using thermodynamic integration, we study the solvation free energy of 18 amino acid side chain equi...
The ability of the GROMOS96 force field to reproduce partition constants between water and two less ...
The ability of the GROMOS96 force field to reproduce partition constants between water and two less ...
The ability of the GROMOS96 force field to reproduce partition constants between water and two less ...
The ability of the GROMOS96 force field to reproduce partition constants between water and two less ...
The ability of the GROMOS96 force field to reproduce partition constants between water and two less ...
The ability of the GROMOS96 force field to reproduce partition constants between water and two less ...
We have studied the hydrophobicity of amino acid side chains by computing conditional solvation free...
The hydrophobic effect is one of the major forces that govern protein folding. We study the hydropho...
The hydrophobic effect is one of the major forces that govern protein folding. We study the hydropho...
Roles of Solvent Water in the Positions of Biological Equilibria The noncovalent binding interaction...
Roles of Solvent Water in the Positions of Biological Equilibria The noncovalent binding interaction...
peer reviewedSolvation free energies of neutral amino acids in water and in chloroform were computed...
AbstractMost proteins perform their function in aqueous solution. The interactions with water determ...
While much is known about the properties of small organic molecules in aqueous solution, one quantit...
Using thermodynamic integration, we study the solvation free energy of 18 amino acid side chain equi...
The ability of the GROMOS96 force field to reproduce partition constants between water and two less ...
The ability of the GROMOS96 force field to reproduce partition constants between water and two less ...
The ability of the GROMOS96 force field to reproduce partition constants between water and two less ...
The ability of the GROMOS96 force field to reproduce partition constants between water and two less ...
The ability of the GROMOS96 force field to reproduce partition constants between water and two less ...
The ability of the GROMOS96 force field to reproduce partition constants between water and two less ...
We have studied the hydrophobicity of amino acid side chains by computing conditional solvation free...
The hydrophobic effect is one of the major forces that govern protein folding. We study the hydropho...
The hydrophobic effect is one of the major forces that govern protein folding. We study the hydropho...
Roles of Solvent Water in the Positions of Biological Equilibria The noncovalent binding interaction...
Roles of Solvent Water in the Positions of Biological Equilibria The noncovalent binding interaction...
peer reviewedSolvation free energies of neutral amino acids in water and in chloroform were computed...
AbstractMost proteins perform their function in aqueous solution. The interactions with water determ...
While much is known about the properties of small organic molecules in aqueous solution, one quantit...