Additional file 3: Surrogate ChIP-seq data for finding indirect regulated targets of transcription factors
Abstract Objectives Mammalian genomics studies, especially those focusing on transcriptional regulat...
List of FUS and EWS ChIP-seq peaks assigned with a position downstream the poly(A)-signal of a targe...
The complete transcription factor annotation results. âLog10 (P value) are provided in parentheses...
Additional file 1: ChIP-seq data used for identifying regulated targets of human transcription facto...
Additional file 4: Number of regulated target genes of individual transcription factors combined fro...
Additional file 2: Regulated targets of transcription factors identified based on each ChIP-seq data...
Additional file 6: Comparison of lists of regulated target genes generated here (ART-TF) with existi...
Additional file 8: Similarity of sets of regulated target genes of TFs in ESCs; z-values show the si...
Additional file 7: Similarity of sets of regulated target genes of most strongly overlapping 150 TFs...
Transcription factor binding site ChIP-seq Data. Filenames and URLs for the transcription factor bin...
TEs with putative promoter activity: contains the list of genomic locations for TEs with putative pr...
Table S1. The brief introduction of two cell lines. Table S2. Transcription factors associated with ...
Figure S3. Visualization of ChiP-seq peaks from ArrayExperss database idenyified in SHOE predictions...
Comparison of the distribution of FindPeaks called ChIP-seq peaks across a model gene using data fro...
International audienceThe large collections of ChIP-seq data rapidly accumulating in public data war...
Abstract Objectives Mammalian genomics studies, especially those focusing on transcriptional regulat...
List of FUS and EWS ChIP-seq peaks assigned with a position downstream the poly(A)-signal of a targe...
The complete transcription factor annotation results. âLog10 (P value) are provided in parentheses...
Additional file 1: ChIP-seq data used for identifying regulated targets of human transcription facto...
Additional file 4: Number of regulated target genes of individual transcription factors combined fro...
Additional file 2: Regulated targets of transcription factors identified based on each ChIP-seq data...
Additional file 6: Comparison of lists of regulated target genes generated here (ART-TF) with existi...
Additional file 8: Similarity of sets of regulated target genes of TFs in ESCs; z-values show the si...
Additional file 7: Similarity of sets of regulated target genes of most strongly overlapping 150 TFs...
Transcription factor binding site ChIP-seq Data. Filenames and URLs for the transcription factor bin...
TEs with putative promoter activity: contains the list of genomic locations for TEs with putative pr...
Table S1. The brief introduction of two cell lines. Table S2. Transcription factors associated with ...
Figure S3. Visualization of ChiP-seq peaks from ArrayExperss database idenyified in SHOE predictions...
Comparison of the distribution of FindPeaks called ChIP-seq peaks across a model gene using data fro...
International audienceThe large collections of ChIP-seq data rapidly accumulating in public data war...
Abstract Objectives Mammalian genomics studies, especially those focusing on transcriptional regulat...
List of FUS and EWS ChIP-seq peaks assigned with a position downstream the poly(A)-signal of a targe...
The complete transcription factor annotation results. âLog10 (P value) are provided in parentheses...
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