The complete transcription factor annotation results. âLog10 (P value) are provided in parentheses following the target functions. (XLSX 153Â kb
Additional file 6: Comparison of lists of regulated target genes generated here (ART-TF) with existi...
Supporting figures. Figure S1. Hierarchical structures of the GM12878 TFs network. Figure S2. Percen...
<p>Full results are listed in <a href="http://www.plosgenetics.org/article/info:doi/10.1371/journal....
Supplementary Results, Methods, Figures (S1-S12), Tables (S1-S5, and S9). Tables S6, S7, S8, S10, S1...
The raw transcription factorâtarget gene (TFTG) relationships in GMT file format for 20,000bp wind...
Functional Annotation Clustering output from DAVID enrichment analysis. (XLS 1695 kb
The complete list of TF pairs with significant target function overlaps but lower than expected targ...
Additional file 1: ChIP-seq data used for identifying regulated targets of human transcription facto...
RWR performance according to gene function. Functions correspond to Gene Ontology molecular function...
Additional file 3: Surrogate ChIP-seq data for finding indirect regulated targets of transcription f...
Supplementary Tables and Figures. Figures S1 to S9. Tables S1 to S14. Text S1—Tools for predicting i...
Additional file 4: Number of regulated target genes of individual transcription factors combined fro...
Results of ToppGene analysis of each of the thirty biological components. (XLSX 571 kb
Additional file 2: Regulated targets of transcription factors identified based on each ChIP-seq data...
TF diversification scores and random forest prediction accuracies. (CSV 609 bytes
Additional file 6: Comparison of lists of regulated target genes generated here (ART-TF) with existi...
Supporting figures. Figure S1. Hierarchical structures of the GM12878 TFs network. Figure S2. Percen...
<p>Full results are listed in <a href="http://www.plosgenetics.org/article/info:doi/10.1371/journal....
Supplementary Results, Methods, Figures (S1-S12), Tables (S1-S5, and S9). Tables S6, S7, S8, S10, S1...
The raw transcription factorâtarget gene (TFTG) relationships in GMT file format for 20,000bp wind...
Functional Annotation Clustering output from DAVID enrichment analysis. (XLS 1695 kb
The complete list of TF pairs with significant target function overlaps but lower than expected targ...
Additional file 1: ChIP-seq data used for identifying regulated targets of human transcription facto...
RWR performance according to gene function. Functions correspond to Gene Ontology molecular function...
Additional file 3: Surrogate ChIP-seq data for finding indirect regulated targets of transcription f...
Supplementary Tables and Figures. Figures S1 to S9. Tables S1 to S14. Text S1—Tools for predicting i...
Additional file 4: Number of regulated target genes of individual transcription factors combined fro...
Results of ToppGene analysis of each of the thirty biological components. (XLSX 571 kb
Additional file 2: Regulated targets of transcription factors identified based on each ChIP-seq data...
TF diversification scores and random forest prediction accuracies. (CSV 609 bytes
Additional file 6: Comparison of lists of regulated target genes generated here (ART-TF) with existi...
Supporting figures. Figure S1. Hierarchical structures of the GM12878 TFs network. Figure S2. Percen...
<p>Full results are listed in <a href="http://www.plosgenetics.org/article/info:doi/10.1371/journal....
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