Publication date
August 2021
DOIAbstract
This file contains the representatives sequences of each OTUs, as the output from the pipeline
This file contains the representatives sequences of each OTUs, as the output from the pipeline
Raw 97% OTU table showing the number of sequences clustered into each UCLUST OTU. Each OTU is identi...
OTUtable with OTUs generated during this study. For each sample, sequence ID matching that of Supple...
This data include two files. One file is 18S rDNA sequences of soil nematodes generated by MiSeq pyr...
This file contains the sequences of the 716 OTUs obtained after all the filtration and clustering st...
Representative sequences for all OTUs for the forward (Euk20F) and Reverse (Euk302r) sequencing dire...
Includes the extracted ITS1 sequences for each operational taxonomic unit resulting from OTU picking...
This file contains the sequences data that was used to construct the phylogenetic tre
Table of OTUs (rows) by sample (columns) after bioinformatics pipeline. See "OTUs fasta file" for re...
file containing sequence and OTU counts for each sample. These statistics are calculated for data th...
This folder contains all scripts used to process the raw sequence data into OTUs. Additionally, all ...
<p>Similarity of representative sequences from the 25 most abundant OTUs to sequences in GenBank.</p
This ZIP file contains a script called GOMS: Get OTU Main Sequence. GOMS is a Perl program based on ...
This archive contains the scripts producing the OTU table (https://doi.org/10.5281/zenodo.5032451) a...
This file contains core bacterial OTUs that occur in >80% of the samples of entire sample se
Fasta file containing repetitiveness sequences of OTUs described using the primer pair ITS3KYO2-ITS4...
Raw 97% OTU table showing the number of sequences clustered into each UCLUST OTU. Each OTU is identi...
OTUtable with OTUs generated during this study. For each sample, sequence ID matching that of Supple...
This data include two files. One file is 18S rDNA sequences of soil nematodes generated by MiSeq pyr...
This file contains the sequences of the 716 OTUs obtained after all the filtration and clustering st...
Representative sequences for all OTUs for the forward (Euk20F) and Reverse (Euk302r) sequencing dire...
Includes the extracted ITS1 sequences for each operational taxonomic unit resulting from OTU picking...
This file contains the sequences data that was used to construct the phylogenetic tre
Table of OTUs (rows) by sample (columns) after bioinformatics pipeline. See "OTUs fasta file" for re...
file containing sequence and OTU counts for each sample. These statistics are calculated for data th...
This folder contains all scripts used to process the raw sequence data into OTUs. Additionally, all ...
<p>Similarity of representative sequences from the 25 most abundant OTUs to sequences in GenBank.</p
This ZIP file contains a script called GOMS: Get OTU Main Sequence. GOMS is a Perl program based on ...
This archive contains the scripts producing the OTU table (https://doi.org/10.5281/zenodo.5032451) a...
This file contains core bacterial OTUs that occur in >80% of the samples of entire sample se
Fasta file containing repetitiveness sequences of OTUs described using the primer pair ITS3KYO2-ITS4...
Raw 97% OTU table showing the number of sequences clustered into each UCLUST OTU. Each OTU is identi...
OTUtable with OTUs generated during this study. For each sample, sequence ID matching that of Supple...
This data include two files. One file is 18S rDNA sequences of soil nematodes generated by MiSeq pyr...
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