Representative sequences for all OTUs for the forward (Euk20F) and Reverse (Euk302r) sequencing direction
Taxonomic assignments of OTUs (binned at 97% 16S rRNA gene sequence identity), generated by comparin...
Table of OTUs (rows) by sample (columns) after bioinformatics pipeline. See "OTUs fasta file" for re...
Mecistops and outgroup sequences for nuclear marker CpP2902. See text file "Shirleyetal_Mecistopssy...
This file contains the representatives sequences of each OTUs, as the output from the pipeline
Includes the extracted ITS1 sequences for each operational taxonomic unit resulting from OTU picking...
This file contains the sequences of the 716 OTUs obtained after all the filtration and clustering st...
Representative OTUs based on 16S sRNA sequence.Clustering done using MOTHUR software</div
OTU table excluding host sequences, including OTU representative sequences and taxonom
<p>Similarity of representative sequences from the 25 most abundant OTUs to sequences in GenBank.</p
FASTA file containing the consensus DNA sequences for the 143 operational taxonomic units (OTU) gene...
Contains taxonomic information and 16S rRNA sequence similarity % for every Otu in Otu_table
<p>Each row represents a separate OTU with the closest match in the database listed on the right. Ea...
Phylogeny of all OTUs (based on 97% 16S rRNA gene sequence identity). Generated from representative ...
Representative sequence for each OTU (based on 97% sequence identity), in FASTA format. Generated fr...
This is the original operational taxonomic unit (OTU) table resulting from the sequences clustering ...
Taxonomic assignments of OTUs (binned at 97% 16S rRNA gene sequence identity), generated by comparin...
Table of OTUs (rows) by sample (columns) after bioinformatics pipeline. See "OTUs fasta file" for re...
Mecistops and outgroup sequences for nuclear marker CpP2902. See text file "Shirleyetal_Mecistopssy...
This file contains the representatives sequences of each OTUs, as the output from the pipeline
Includes the extracted ITS1 sequences for each operational taxonomic unit resulting from OTU picking...
This file contains the sequences of the 716 OTUs obtained after all the filtration and clustering st...
Representative OTUs based on 16S sRNA sequence.Clustering done using MOTHUR software</div
OTU table excluding host sequences, including OTU representative sequences and taxonom
<p>Similarity of representative sequences from the 25 most abundant OTUs to sequences in GenBank.</p
FASTA file containing the consensus DNA sequences for the 143 operational taxonomic units (OTU) gene...
Contains taxonomic information and 16S rRNA sequence similarity % for every Otu in Otu_table
<p>Each row represents a separate OTU with the closest match in the database listed on the right. Ea...
Phylogeny of all OTUs (based on 97% 16S rRNA gene sequence identity). Generated from representative ...
Representative sequence for each OTU (based on 97% sequence identity), in FASTA format. Generated fr...
This is the original operational taxonomic unit (OTU) table resulting from the sequences clustering ...
Taxonomic assignments of OTUs (binned at 97% 16S rRNA gene sequence identity), generated by comparin...
Table of OTUs (rows) by sample (columns) after bioinformatics pipeline. See "OTUs fasta file" for re...
Mecistops and outgroup sequences for nuclear marker CpP2902. See text file "Shirleyetal_Mecistopssy...
DOI
Add to ORKG