This folder contains all scripts used to process the raw sequence data into OTUs. Additionally, all scripts for data analysis and figure generation were included
Workflow for processing NGS data from metabarcoding experiments"If you use this pipeline, please cit...
The otu table and related processing code for meta-analysis of dilution-to-extinction studies.</p
Scripts used in analyses and plotting selected figures. See also https://github.com/marekborowiec...
This folder contains all scripts used to process the raw sequence data into OTUs. Additionally, all ...
This archive contains the scripts producing the OTU table (https://doi.org/10.5281/zenodo.5032451) a...
This dataset includes the post-denoising (BLUE) and post-merging (FLASH) sequence data, the map file...
This file contains an OTU table from each experiment and identifications for each OTU from Biocode, ...
Raw data files and intermediate results of the feature tabulation and taxonomic classification of am...
Each file contains the meiofauna sequences obtained by metabarcoding from 13 samples points, in a ti...
This is a test dataset for the metabarcoding_QAQC_pipeline repo: https://github.com/MMARINeDNA/meta...
This file contains all necessary commands and scripts to reproduce the outputs uploaded here (SNP, m...
Tutorial for the analysis of 16S rRNA metabarcoding sequences using the MiSeq SOP pipeline. https://...
These are the scripts to prepare the input data files for the eDNAPlus software (https://github.com/...
A collection of scripts and workflows of the manuscript "High-quality metagenome assembly from long ...
Data files: 1) Optical density measurements in Phase 1 2) Optical density measurements in Phase 2 3)...
Workflow for processing NGS data from metabarcoding experiments"If you use this pipeline, please cit...
The otu table and related processing code for meta-analysis of dilution-to-extinction studies.</p
Scripts used in analyses and plotting selected figures. See also https://github.com/marekborowiec...
This folder contains all scripts used to process the raw sequence data into OTUs. Additionally, all ...
This archive contains the scripts producing the OTU table (https://doi.org/10.5281/zenodo.5032451) a...
This dataset includes the post-denoising (BLUE) and post-merging (FLASH) sequence data, the map file...
This file contains an OTU table from each experiment and identifications for each OTU from Biocode, ...
Raw data files and intermediate results of the feature tabulation and taxonomic classification of am...
Each file contains the meiofauna sequences obtained by metabarcoding from 13 samples points, in a ti...
This is a test dataset for the metabarcoding_QAQC_pipeline repo: https://github.com/MMARINeDNA/meta...
This file contains all necessary commands and scripts to reproduce the outputs uploaded here (SNP, m...
Tutorial for the analysis of 16S rRNA metabarcoding sequences using the MiSeq SOP pipeline. https://...
These are the scripts to prepare the input data files for the eDNAPlus software (https://github.com/...
A collection of scripts and workflows of the manuscript "High-quality metagenome assembly from long ...
Data files: 1) Optical density measurements in Phase 1 2) Optical density measurements in Phase 2 3)...
Workflow for processing NGS data from metabarcoding experiments"If you use this pipeline, please cit...
The otu table and related processing code for meta-analysis of dilution-to-extinction studies.</p
Scripts used in analyses and plotting selected figures. See also https://github.com/marekborowiec...
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